Description Usage Arguments Details Value Note Author(s) See Also Examples
This function provides ways for cluster mapping. For each locality (lines in data), values of four parameters are given. Pi: Presence of the cluster i (presence/absence of at least one species of the cluster); SRi: Species Richness of the cluster i (number of species of the cluster); MMDi: Maximum Membership Degree-of any species-in the cluster i (fuzzy version of Pi); FSRi: Fuzzy Species Richness (fuzzy version of SRi, i.e sum of all species' degree of membership in the cluster i).
1 | locCorotGrupos(fuzzyres, grupos)
|
fuzzyres |
object resulting from function |
grupos |
dendrogram clusters-identified by the analyst-on which the analysis is focused (see |
Before applying locCorotGrupos
, fuzzy.Clusters
must be run, and outputs stored as object fuzzyres
.
Function locCorotGrupos
currently only works if fuzzy.Clusters
was run with an object (macoquires
) which resulted from executing macoqui
with a presences/absences data set.
This function returns the input list (invisibly), with one added element which is also shown in the console:
locGrupos |
locality identification (correlative numbers starting in 1 are given to rows in data); Pi, SRi, MMDi and FSRi values of every cluster i in each locality |
This function can take some computing time for large data sets.
Jesus Olivero, Ramon Hidalgo, Ana L. Marquez, A. Marcia Barbosa, Raimundo Real
fuzzy.Clusters
, ver.matRmacoqui
1 2 3 4 5 | data(amphib)
macoquires <- macoqui(amphib)
grupos <- c(12,1,12,2,13,1,13,2,15,1,10,1,10,2,17,2)
fuzzyres <- fuzzy.Clusters(macoquires, grupos)
fuzzylocs <- locCorotGrupos(fuzzyres, grupos)
|
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