Description Objects from the Class Slots Extends Methods Author(s) See Also Examples
This class holds the results of NONMEM 7 problems that both simulate data and fit the model during each simulation (that is, models with a $SIM statement in the control file but no "ONLY" keyword).
Objects can be created by calls of the form new("NMSimModel7", ...)
. There is also an internal constructor
NMSimModelNM7
, but it is not meant to be called directly. Most of the time, instances of this class will be
created when importing a run via importNm
numSimulations
:Object of class "numeric"
. Number of simulations generated
objectiveFinal
:Object of class "matrix"
Matrix of final values of the objective functions. One dimension is for the method, one is for the simulation sub-problem.
numMethods
:Object of class "numeric"
Number of estimation methods used
methodInfo
:Object of class "matrix"
Partially parsed matrix of $EST information
methodNames
:Object of class "character"
Names of the estimation methods used,
thetaFinal
:Object of class "array"
3 dimensional array of estimation results, with one dimension for the simulations, one for the parameters, and one for the methods
omegaFinal
:Object of class "list"
List of 3d arrays of omega estimates (the third dimension is for the simulations)
sigmaFinal
:Object of class "list"
List of 3d arrays of sigma estimates (the third dimension is for the simulations)
thetaInitial
:Object of class "vector"
. Initial values of thetas
omegaInitial
:Object of class "matrix"
. Initial values of omegas
sigmaInitial
:Object of class "matrix"
. Initial values of sigmas
seeds
:Object of class "numeric"
. Values of seeds used for random-number generation
Class "NMProblem"
, directly.
signature(obj = "NMSimModelNM7")
: Create user-defined categorical variables
signature(obj = "NMSimModelNM7")
: Retrieves the estimation method names
signature(obj = "NMSimModelNM7")
: Retrieves a set of objective function values for given methods (method) and simulation (subProblem)
signature(obj = "NMSimModelNM7")
: Retrieves an array of omegas for a given method (method) and simulations (subProblemNum)
signature(obj = "NMSimModelNM7")
: Retrieves an array of sigmas for a given method (method) and simulations (subProblemNum)
signature(obj = "NMSimModelNM7")
: Retrieves a matrix of thetas for a given method (method) and simulations (subProblemNum)
signature(obj = "NMSimModelNM7")
: Extracts NONMEM data. A parameter stackInput is also available.
If TRUE, will cause input to be "stacked" enough times that it matches the size of the output.
signature(obj = "NMSimModelNM7")
: Coerces variables to categories
signature(object = "NMSimModelNM7")
: ...
Mango Solutions
1 | showClass("NMSimModelNM7")
|
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