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# R package 'abremout'
# output methods for the abrem object
# May 2013, Jurgen Symynck
# Copyright 2013, Jurgen Symynck
#
# For the latest version of this file, check the Subversion repository at
# http://r-forge.r-project.org/projects/abernethy/
#
# Disclaimer:
# The author is not affiliated with Dr. Abernethy or Wes Fulton - CEO of
# Fulton Findings(TM) and author of the software package SuperSMITH
#-------------------------------------------------------------------------------
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
#
# For more info on this software and its predecesser, the "weibulltoolkit",
# consult following documents:
#
# - "Weibull analysis using R, in a nutshell",
# (Jurgen Symynck, Filip De Bal, 2010)
# - "Monte Carlo pivotal confidence bounds for Weibull analysis
# with implementations in R",
# (Jurgen Symynck, Filip De Bal, 2011)
#
# +-----------------------------------+
# | execute this program with R: |
# | http://www.r-project.org/ |
# +-----------------------------------+
#
Blifestring <- function(B,blicon,signif,...){
# This functions creates a string for displaying the B-lives in the plot's
# legend. missing input data result in an "NA". For example, the output
# string could look like:
# "B10 = 9.86 | 50.13 | 103.4"
# or
# "B1 = 9.86 | 50.13 | NA"
si <- function(number)
if(!is.null(number))signif(number,signif)
else NA
# shorthand writing of the signif() function
qfun <- function(B,...){
args <- as.list(unlist(...))
# this doesn't look very nice, does it? but it works
ret <- NULL
if(!is.null(args$beta) && !is.null(args$eta)){
# the fit type was weibull
ret <- qweibull(B,args$beta,args$eta)
}
if(!is.null(args$meanlog) && !is.null(args$sdlog)){
# the fit type was lognormal
ret <- qlnorm(B,args$meanlog,args$sdlog)
}
if(!is.null(args$rate)){
# the fit type was exponential
ret <- qexp(B,args$rate)
}
ret
}
id <- function(x,y)isTRUE(all.equal(x,y))
c1 <- is.null(blicon$bounds) || is.null(blicon$bounds$Lower)
lo <- si(subset(blicon$bounds,
sapply(blicon$bounds$unrel,id,B),Lower))
c2 <- is.null(blicon$bounds) || is.null(blicon$bounds$Upper)
up <- si(subset(blicon$bounds,
sapply(blicon$bounds$unrel,id,B),Upper))
ret <- paste(sep = ""," B",signif(100*B)," = ",
ifelse(c1,
"NA",lo),
" | ",si(qfun(B,...)),
" | ",ifelse(c2,
"NA",up))
ret
# NA
}
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