adephylo: adephylo: exploratory analyses for the phylogenetic comparative method.

Multivariate tools to analyze comparative data, i.e. a phylogeny and some traits measured for each taxa.

AuthorThibaut Jombart <t.jombart@imperial.ac.uk>, Stephane Dray <stephane.dray@univ-lyon1.fr>, Anders Ellern Bilgrau <abilgrau@math.aau.dk>
Date of publication2015-02-21 12:44:06
MaintainerThibaut Jombart <t.jombart@imperial.ac.uk>
LicenseGPL (>=2)
Version1.1-7

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Files in this package

adephylo/ChangeLog
adephylo/DESCRIPTION
adephylo/NAMESPACE
adephylo/R
adephylo/R/abouheif.R adephylo/R/bullseye.R adephylo/R/dibas.R adephylo/R/distances.R adephylo/R/moran.R adephylo/R/orthobasis.R adephylo/R/orthogram.R adephylo/R/partition.R adephylo/R/ppca.R adephylo/R/proximities.R adephylo/R/table.phylo4d.R adephylo/R/utils.R adephylo/R/zzz.R
adephylo/TODO
adephylo/build
adephylo/build/vignette.rds
adephylo/data
adephylo/data/carni19.RData
adephylo/data/carni70.RData
adephylo/data/lizards.RData
adephylo/data/maples.RData
adephylo/data/mjrochet.RData
adephylo/data/palm.RData
adephylo/data/procella.RData
adephylo/data/tithonia.RData
adephylo/data/ungulates.RData
adephylo/inst
adephylo/inst/CITATION
adephylo/inst/doc
adephylo/inst/doc/adephylo.R
adephylo/inst/doc/adephylo.Rnw
adephylo/inst/doc/adephylo.pdf
adephylo/man
adephylo/man/abouheif.Rd adephylo/man/adephylo.package.Rd adephylo/man/bullseye.Rd adephylo/man/carni19.Rd adephylo/man/carni70.Rd adephylo/man/dibas.Rd adephylo/man/distRoot.Rd adephylo/man/distTips.Rd adephylo/man/listDD.Rd adephylo/man/listTips.Rd adephylo/man/lizards.Rd adephylo/man/maples.Rd adephylo/man/miscUtils.Rd adephylo/man/mjrochet.Rd adephylo/man/moranIdx.Rd adephylo/man/orthobasis.Rd adephylo/man/orthogram.Rd adephylo/man/palm.Rd adephylo/man/ppca.Rd adephylo/man/procella.Rd adephylo/man/proxTips.Rd adephylo/man/sp.tips.Rd adephylo/man/table.phylo4d.Rd adephylo/man/tithonia.Rd adephylo/man/treePart.Rd adephylo/man/ungulates.Rd
adephylo/src
adephylo/src/adesub.c
adephylo/src/adesub.h
adephylo/src/distPhylo.c
adephylo/src/misc.c
adephylo/src/phylog.c
adephylo/src/sptips.c
adephylo/src/sptips.h
adephylo/vignettes
adephylo/vignettes/adephylo.Rnw
adephylo/vignettes/figs
adephylo/vignettes/figs/adephylo-012.pdf
adephylo/vignettes/figs/adephylo-012.png
adephylo/vignettes/figs/adephylo-016.pdf
adephylo/vignettes/figs/adephylo-017.pdf
adephylo/vignettes/figs/adephylo-017.png
adephylo/vignettes/figs/adephylo-018.pdf
adephylo/vignettes/figs/adephylo-aboutest.pdf
adephylo/vignettes/figs/adephylo-figFourBas.pdf
adephylo/vignettes/figs/adephylo-lm1.pdf
adephylo/vignettes/figs/adephylo-loadings.pdf
adephylo/vignettes/figs/adephylo-orthobas1.pdf
adephylo/vignettes/figs/adephylo-pca1.pdf
adephylo/vignettes/figs/adephylo-pca2.pdf
adephylo/vignettes/figs/adephylo-phylo4d.pdf
adephylo/vignettes/figs/adephylo-phylo4d.png
adephylo/vignettes/figs/adephylo-resid.pdf
adephylo/vignettes/figs/adephylo-treePart.pdf
adephylo/vignettes/figs/adephylo-treePart.png

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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