bbmle: Tools for general maximum likelihood estimation

Methods and functions for fitting maximum likelihood models in R. This package modifies and extends the mle classes in the stats4 package.

AuthorBen Bolker <bolker@mcmaster.ca>, R Development Core Team
Date of publication2014-09-02 03:03:08
MaintainerBen Bolker <bolker@mcmaster.ca>
LicenseGPL
Version1.0.18

View on R-Forge

Functions

AICc Man page
AICc,ANY-method Man page
AICc,ANY,mle2,logLik-method Man page
AICc,logLik-method Man page
AICc-methods Man page
AICc,mle2-method Man page
AICctab Man page
AIC-methods Man page
AIC,mle2-method Man page
AICtab Man page
anova,mle2-method Man page
as.data.frame.profile.mle2 Man page
BIC Man page
BIC,ANY-method Man page
BIC,ANY,mle2,logLik-method Man page
BIC,logLik-method Man page
BIC-methods Man page
BIC,mle2-method Man page
BICtab Man page
calc_mle2_function Man page
call.to.char Man page
coef,mle2-method Man page
coef,summary.mle2-method Man page
coerce,mle,mle2-method Man page
coerce,profile.mle2,data.frame-method Man page
coerce,profile.mle2-method Man page
confint.mle2 Man page
confint,mle2-method Man page
confint,profile.mle2-method Man page
deviance,mle2-method Man page
formula,mle2-method Man page
get.mnames Man page
gfun Man page
ICtab Man page
logLik-methods Man page
logLik,mle2-method Man page
mle Man page
mle2 Man page
mle2-class Man page
mle2.options Man page
namedrop Man page
parnames Man page
parnames<- Man page
plot.profile.mle2 Man page
plot,profile.mle2-method Man page
plot,profile.mle2,missing-method Man page
predict-methods Man page
predict,mle2-method Man page
print.ICtab Man page
profile-methods Man page
profile.mle2 Man page
profile.mle2-class Man page
profile,mle2-method Man page
qAIC Man page
qAIC,ANY-method Man page
qAIC,ANY,mle2,logLik-method Man page
qAICc Man page
qAICc,ANY-method Man page
qAICc,ANY,mle2,logLik-method Man page
qAICc,logLik-method Man page
qAICc-methods Man page
qAICc,mle2-method Man page
qAIC,logLik-method Man page
qAIC-methods Man page
qAIC,mle2-method Man page
relist2 Man page
residuals,mle2-method Man page
sbeta Man page
sbetabinom Man page
sbinom Man page
show,mle2-method Man page
show,profile.mle2-method Man page
show,summary.mle2-method Man page
simulate,mle2-method Man page
slice Man page
slice1D Man page
slice2D Man page
slice.mle2-class Man page
slice,mle2-method Man page
sliceOld Man page
slicetrans Man page
snbinom Man page
snorm Man page
spois Man page
stdEr Man page
stdEr,mle2-method Man page
strwrapx Man page
summary.mle2-class Man page
summary,mle2-method Man page
update,mle2-method Man page
vcov,mle2-method Man page

Files

DESCRIPTION
NAMESPACE
R
R/IC.R R/confint.R R/dists.R R/mle.R R/mle2-class.R R/mle2-methods.R R/predict.R R/profile.R R/slice.R R/update.R
TODO
build
build/vignette.rds
inst
inst/NEWS.Rd
inst/doc
inst/doc/mle2.Rnw
inst/doc/mle2.pdf
inst/doc/quasi.Rnw
inst/doc/quasi.pdf
inst/unitTests
inst/unitTests/Makefile
inst/unitTests/boundstest.R
inst/vignetteData
inst/vignetteData/orob1.rda
man
man/BIC-methods.Rd man/ICtab.Rd man/as.data.frame.profile.mle2.Rd man/call.to.char.Rd man/get.mnames.Rd man/mle-class.Rd man/mle2.Rd man/mle2.options.Rd man/namedrop.Rd man/parnames.Rd man/predict-methods.Rd man/profile-methods.Rd man/profile.mle-class.Rd man/relist.Rd man/sbinom.Rd man/slice.Rd man/slice.mle-class.Rd man/strwrapx.Rd man/summary.mle-class.Rd
tests
tests/BIC.R
tests/BIC.Rout.save
tests/ICtab.R
tests/ICtab.Rout.save
tests/Makefile
tests/RUnit-tests.R tests/binomtest1.R
tests/binomtest1.Rout.save
tests/controleval.R
tests/controleval.Rout.save
tests/doRUnit.R tests/eval.R
tests/eval.Rout.save
tests/formulatest.R
tests/formulatest.Rout.save
tests/glmcomp.R
tests/glmcomp.Rout.save
tests/gradient_vecpar_profile.R
tests/gradient_vecpar_profile.Rout.save
tests/grtest1.R
tests/grtest1.Rout.save
tests/makesavefiles
tests/methods.R
tests/methods.Rout.save
tests/mortanal.R
tests/mortanal.Rout.save
tests/optimize.R
tests/optimize.Rout.save
tests/optimizers.R
tests/optimizers.Rout.save
tests/optimx.R
tests/optimx.Rout.save
tests/order.R
tests/order.Rout.save
tests/parscale.R
tests/parscale.Rout.save
tests/predict.R
tests/predict.Rout.save
tests/profbound.R
tests/profbound.Rout.save
tests/richards.R
tests/richards.Rout.save
tests/startvals.R
tests/startvals.Rout.save
tests/startvals2.R
tests/startvals2.Rout.save
tests/test-relist1.R
tests/test-relist1.Rout.save
tests/testbounds.R
tests/testbounds.Rout.save
tests/testderiv.R
tests/testderiv.Rout.save
tests/testenv.R
tests/testenv.Rout.save
tests/testparpred.R
tests/testparpred.Rout.save
tests/update.R
tests/update.Rout.save
vignettes
vignettes/cc-attrib-nc.png
vignettes/clean
vignettes/mle2.Rnw
vignettes/mle2.bib
vignettes/quasi.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.