bbmle: Tools for general maximum likelihood estimation
Version 1.0.18

Methods and functions for fitting maximum likelihood models in R. This package modifies and extends the mle classes in the stats4 package.

AuthorBen Bolker <bolker@mcmaster.ca>, R Development Core Team
Date of publication2014-09-02 03:03:08
MaintainerBen Bolker <bolker@mcmaster.ca>
LicenseGPL
Version1.0.18
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("bbmle", repos="http://R-Forge.R-project.org")

Popular man pages

get.mnames: extract model names
mle2: Maximum Likelihood Estimation
mle-class: Class "mle2". Result of Maximum Likelihood Estimation.
predict-methods: Predicted values from an mle2 fit
profile-methods: Likelihood profiles
sbinom: Abstract definitions of distributions
summary.mle-class: Class "summary.mle2", summary of "mle2" objects
See all...

All man pages Function index File listing

Man pages

as.data.frame.profile.mle2: convert profile to data frame
BIC-methods: Log likelihoods and model selection for mle2 objects
call.to.char: Convert calls to character
get.mnames: extract model names
ICtab: Compute table of information criteria and auxiliary info
mle2: Maximum Likelihood Estimation
mle2.options: Options for maximum likelihood estimation
mle-class: Class "mle2". Result of Maximum Likelihood Estimation.
namedrop: drop unneeded names from list elements
parnames: get and set parameter names
predict-methods: Predicted values from an mle2 fit
profile-methods: Likelihood profiles
profile.mle-class: Methods for likelihood profiles
relist: reconstruct the structure of a list
sbinom: Abstract definitions of distributions
slice: Calculate likelihood "slices"
slice.mle-class: likelihood-surface slices
strwrapx: Wrap strings at white space and + symbols
summary.mle-class: Class "summary.mle2", summary of "mle2" objects

Functions

AIC,mle2-method Man page
AIC-methods Man page
AICc Man page
AICc,ANY,mle2,logLik-method Man page
AICc,ANY-method Man page
AICc,logLik-method Man page
AICc,mle2-method Man page
AICc-methods Man page
AICctab Man page Source code
AICtab Man page Source code
BIC Man page
BIC,ANY,mle2,logLik-method Man page
BIC,ANY-method Man page
BIC,logLik-method Man page
BIC,mle2-method Man page
BIC-methods Man page
BICtab Man page Source code
ICtab Man page Source code
anova,mle2-method Man page
as.data.frame.profile.mle2 Man page Source code
calc_mle2_function Man page Source code
call.to.char Man page Source code
coef,mle2-method Man page
coef,summary.mle2-method Man page
coerce,mle,mle2-method Man page
coerce,profile.mle2,data.frame-method Man page
coerce,profile.mle2-method Man page
confint,mle2-method Man page
confint,profile.mle2-method Man page
confint.mle2 Man page
deviance,mle2-method Man page
formula,mle2-method Man page
get.mnames Man page Source code
get_all_trange Source code
get_trange Source code
gfun Man page Source code
logLik,mle2-method Man page
logLik-methods Man page
mkpar Source code
mle Man page
mle2 Man page Source code
mle2-class Man page
mle2.options Man page Source code
namedrop Man page Source code
parnames Man page Source code
parnames<- Man page
plot,profile.mle2,missing-method Man page
plot,profile.mle2-method Man page
plot.profile.mle2 Man page
plot.slice Source code
predict,mle2-method Man page
predict-methods Man page
print.ICtab Man page Source code
profile,mle2-method Man page
profile-methods Man page
profile.mle2 Man page
profile.mle2-class Man page
qAIC Man page
qAIC,ANY,mle2,logLik-method Man page
qAIC,ANY-method Man page
qAIC,logLik-method Man page
qAIC,mle2-method Man page
qAIC-methods Man page
qAICc Man page
qAICc,ANY,mle2,logLik-method Man page
qAICc,ANY-method Man page
qAICc,logLik-method Man page
qAICc,mle2-method Man page
qAICc-methods Man page
relist2 Man page Source code
residuals,mle2-method Man page
sbeta Man page Source code
sbetabinom Man page Source code
sbinom Man page Source code
sgamma Source code
show,mle2-method Man page
show,profile.mle2-method Man page
show,summary.mle2-method Man page
simulate,mle2-method Man page
slice Man page Source code
slice,mle2-method Man page
slice.mle2 Source code
slice.mle2-class Man page
slice0 Source code
slice1D Man page Source code
slice2D Man page Source code
sliceOld Man page Source code
slices_apply Source code
slicetrans Man page Source code
snbinom Man page Source code
snorm Man page Source code
splom.slice Source code
spois Man page Source code
stdEr Man page
stdEr,mle2-method Man page
strwrapx Man page Source code
summary,mle2-method Man page
summary.mle2-class Man page
update,mle2-method Man page
vcov,mle2-method Man page
xyplot.slice Source code

Files

DESCRIPTION
NAMESPACE
R
R/IC.R
R/confint.R
R/dists.R
R/mle.R
R/mle2-class.R
R/mle2-methods.R
R/predict.R
R/profile.R
R/slice.R
R/update.R
TODO
build
build/vignette.rds
inst
inst/NEWS.Rd
inst/doc
inst/doc/mle2.Rnw
inst/doc/mle2.pdf
inst/doc/quasi.Rnw
inst/doc/quasi.pdf
inst/unitTests
inst/unitTests/Makefile
inst/unitTests/boundstest.R
inst/vignetteData
inst/vignetteData/orob1.rda
man
man/BIC-methods.Rd
man/ICtab.Rd
man/as.data.frame.profile.mle2.Rd
man/call.to.char.Rd
man/get.mnames.Rd
man/mle-class.Rd
man/mle2.Rd
man/mle2.options.Rd
man/namedrop.Rd
man/parnames.Rd
man/predict-methods.Rd
man/profile-methods.Rd
man/profile.mle-class.Rd
man/relist.Rd
man/sbinom.Rd
man/slice.Rd
man/slice.mle-class.Rd
man/strwrapx.Rd
man/summary.mle-class.Rd
tests
tests/BIC.R
tests/BIC.Rout.save
tests/ICtab.R
tests/ICtab.Rout.save
tests/Makefile
tests/RUnit-tests.R
tests/binomtest1.R
tests/binomtest1.Rout.save
tests/controleval.R
tests/controleval.Rout.save
tests/doRUnit.R
tests/eval.R
tests/eval.Rout.save
tests/formulatest.R
tests/formulatest.Rout.save
tests/glmcomp.R
tests/glmcomp.Rout.save
tests/gradient_vecpar_profile.R
tests/gradient_vecpar_profile.Rout.save
tests/grtest1.R
tests/grtest1.Rout.save
tests/makesavefiles
tests/methods.R
tests/methods.Rout.save
tests/mortanal.R
tests/mortanal.Rout.save
tests/optimize.R
tests/optimize.Rout.save
tests/optimizers.R
tests/optimizers.Rout.save
tests/optimx.R
tests/optimx.Rout.save
tests/order.R
tests/order.Rout.save
tests/parscale.R
tests/parscale.Rout.save
tests/predict.R
tests/predict.Rout.save
tests/profbound.R
tests/profbound.Rout.save
tests/richards.R
tests/richards.Rout.save
tests/startvals.R
tests/startvals.Rout.save
tests/startvals2.R
tests/startvals2.Rout.save
tests/test-relist1.R
tests/test-relist1.Rout.save
tests/testbounds.R
tests/testbounds.Rout.save
tests/testderiv.R
tests/testderiv.Rout.save
tests/testenv.R
tests/testenv.Rout.save
tests/testparpred.R
tests/testparpred.Rout.save
tests/update.R
tests/update.Rout.save
vignettes
vignettes/cc-attrib-nc.png
vignettes/clean
vignettes/mle2.Rnw
vignettes/mle2.bib
vignettes/quasi.Rnw
bbmle documentation built on May 21, 2017, 12:48 a.m.