extractBicList: Extracting biclusters from the results of running fabia, isa,...

Description Usage Arguments Value

View source: R/extractBicList.R

Description

This is used to extract the labels of samples and variables from a biclustering result using either fabia, plaid, isa.

Usage

1
extractBicList(data, biclustRes, p, bcMethod=c("Fabia","Isa", "Plaid")[1])

Arguments

data

data used in biclustering (e.g., expression matrix).

biclustRes

Biclustering output.

p

Number of biclusters, default is 10.

bcMethod

Biclustering method used, c("fabia", "plaid","isa").

Value

A list of length 2 displaying the following objects for each p biclusters.

samples

sample names

variables

variable names


biclustRank documentation built on May 31, 2017, 2:32 a.m.