edbQuery.RODBC_Excel: Send and retrieve a query in an MS Excel database (referenced...

Description Usage Arguments Value Author(s) See Also Examples

View source: R/easyrodbcexcel.R

Description

Send and retrieve a query in a SQLIte database (referenced by 'edb').

Usage

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## S3 method for class 'RODBC_Excel'
edbQuery(edb, statement, formatCol = NULL, 


    testFiles = TRUE, readOnly = TRUE, verbose = FALSE, 


    ...)

Arguments

edb

An object of class 'edb', such as returned by edb.

statement

Single character string. SQL statement / SQL query to be passed

to link[RODBC]{sqlQuery}.

formatCol

If not NULL, a named list of functions to be applied to certain columns

after the data has been extracted from the database. The name of each list

item gives the column to process, and the value of each item gives the

function that must be applied. For instance

formatCol = list("DATE"=as.Date) will apply the function

as.Date to the column "DATE".

testFiles

Single logical. Should the function test for the presence

(file.exist()) of the needed files in the folder before trying

to fetch information from the database?

readOnly

Single logical. If TRUE, the Excel file will be considered

as read only. See odbcConnectExcel or

odbcConnectExcel2007.

verbose

Single logical. If TRUE, information on what is done are output

on screen.

...

Additional parameters to be passed to link[RODBC]{sqlQuery}.

Value

The function returns the requested table.

Author(s)

Julien MOEYS <Julien.Moeys@mark.slu.se>

See Also

edb, link[RODBC]{sqlQuery}.

Examples

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library( "easyrodbcexcel" ) 











# System check. Ingnore this or set 'testODBC' to TRUE 


testODBC <- (class(try(odbcDataSources())) != "try-error") & # Check (R)ODBC 


            (Sys.info()[[ "sysname" ]] == "Windows") &       # Only MS Windows


            (.Machine$"sizeof.pointer" == 4)                 # Only 32-bits 











### Windows only:


if( testODBC ){ 


    ### Make a copy of Excel example file:


    #   (a database of soil profile description) 


    file.copy( 


        from = system.file( "soils.xls", package = "easyrodbcexcel" ), 


        to   = "soils.xls" 


    )   


    


    # soils.xls is now in your working directory.


    


    


    


    library( "RODBC" ) # Because soils.db is a SQLite database...


    


    


    


    ### Describe the database (NB: this is not a connection)


    myDb <- edb( dbType = "RODBC_Excel", dbName = "soils.xls" ) 


    


    


    


    ### Use the database:





    ## Read data in a table in the database


    


    # Retrieve a table (data.frame style subsetting):


    myDb[ "WRB_SOIL_GROUP" ]


    


    # Same operation, but with edbRead()


    edbRead( edb = myDb, tableName = "WRB_SOIL_GROUP" ) 


    


    # Retrieve part of a table (with row constrains)


    myDb[ "WRB_SOIL_GROUP", list("ABBREV" = c("AC","CR","PL")), 


        verbose = TRUE ] 


    


    # Same operation, but with edbQuery() 


    edbQuery( edb = myDb, statement = 


        "SELECT * FROM [WRB_SOIL_GROUP] WHERE [ABBREV] IN ('AC','CR','PL')" ) 





    ### Clean-up


    file.remove( "soils.xls" ) 


    


    


    


    ### Access 2007 ---------------------------------------------


    file.copy( 


        from = system.file( "soils.xlsx", package = "easyrodbcexcel" ), 


        to   = "soils.xlsx" 


    )   


    


    # soils.db is now in your working directory.


    


    


    


    library( "RODBC" ) # Because soils.db is a SQLite database...


    


    


    


    ### Describe the database (NB: this is not a connection)


    myDb2 <- edb( dbType = "RODBC_Excel", dbName = "soils.xlsx", 


        excelVersion = 2007 ) 


    


    


    


    ### Use the database:





    ## Read data in a table in the database


    


    # Retrieve a table (data.frame style subsetting):


    myDb2[ "WRB_SOIL_GROUP" ]


    


    # Same operation, but with edbRead()


    edbRead( edb = myDb2, tableName = "WRB_SOIL_GROUP" ) 


    


    # Retrieve part of a table (with row constrains)


    myDb2[ "WRB_SOIL_GROUP", list("ABBREV" = c("AC","CR","PL")), 


        verbose = TRUE ] 


    


    # Same operation, but with edbQuery() 


    edbQuery( edb = myDb2, statement = 


        "SELECT * FROM [WRB_SOIL_GROUP] WHERE [ABBREV] IN ('AC','CR','PL')" ) 


    


    ### Clean-up


    file.remove( "soils.xlsx" ) 


}   #

easyrodbcexcel documentation built on May 2, 2019, 6:12 p.m.