Description Usage Arguments Details Value

Check for a given community how the mean pairwise distance changes with the parameter a in FPDist

1 2 | ```
ConDivSimComm(comm, PDist, FDist, Sim, p = 2, Plot = TRUE, ord = TRUE,
disp99 = FALSE, num.a = 20)
``` |

`comm` |
A vector over the species in the regional pool, giving the presence or absence of the species occurring in the community (1 for present species, 0 for absent species). |

`PDist` |
Phylogenetic distance matrix over the species in the regional pool. |

`FDist` |
Functional distance matrix over the species in the regional pool. |

`Sim` |
The number of permutations of the presence vector used to make the estimations. |

`p` |
Parameter passed to |

`Plot` |
TRUE or FALSE to make the plot of the
expected average mean pairwise distance over a range of
a-values ( |

`ord` |
Order rows and columns of the matrices?
(defaults to |

`disp99` |
Display the 99% interval? |

`num.a` |
Number of a-values to compute. |

If `plot == TRUE`

, then a surface is drawn giving the
null distribution. Lighter shades of gray give larger
intervals with categories: 0.005-0.995 = 99%, 0.025-0.975
= 95%, 0.05-0.95 = 90%, 0.25-0.75 = 50%.

TODO

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