Generalised Linear Mixed Models with BUGS and JAGS

addSpatial | Calculate adjacency values for WinBUGS |

binToBinom | Convert Bernoulli observations to Binomial |

checkChain | Plot an MCMC run |

cholInvArray | Precision matrices to variance matrices for Winbugs output |

getDesignMatrix | Computes a design matrix from factors and interactions |

getRaggedSeq | Get one sequence for a ragged array |

getStartingValues | Extract starting values for an MCMC chain from glmmPQL... |

glmmBUGS | A function to run Generalised Linear Mixed Models in Bugs |

glmmPQLstrings | An alternat interface to glmmPQL |

mergeBugsData | Merge results from BUGS into a data.frame or SPDF |

muscleResult | data set contains muscle result |

ontario | Ontario data on molar cancer |

ontarioResult | Ontario Winbugs Results |

popDataAdjMat | Data set containing an adjacency matrix |

restoreParams | Reparametrise bugs output |

rongelapUTM | Rongelap island data |

startingFunction | Write a function to generate random MCMC starting values |

summaryChain | Compute mean, standard deviation, and quantiles of an MCMC... |

winBugsRaggedArray | Ragged Arrays for multilevel models in BUGS |

writeBugsModel | Write a bugs model file for a Generalised Linear Mixed Model |

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