heplots: Visualizing Hypothesis Tests in Multivariate Linear Models

Provides HE plot and other functions for visualizing hypothesis tests in multivariate linear models. HE plots represent sums-of-squares-and- products matrices for linear hypotheses and for error using ellipses (in two dimensions) and ellipsoids (in three dimensions). The related 'candisc' package provides visualizations in a reduced-rank canonical discriminant space when there are more than a few response variables.

AuthorJohn Fox [aut], Michael Friendly [aut, cre], Georges Monette [ctb]
Date of publication2016-11-20 17:25:36
MaintainerMichael Friendly <friendly@yorku.ca>
LicenseGPL (>= 2)
Version1.3-4
http://datavis.ca/R/index.php#heplots

View on R-Forge

Man pages

AddHealth: Adolescent Health Data

Adopted: Adopted Children

arrow3d: Draw a 3D Arrow in an RGL Scene

bartlettTests: Bartlett Tests of Homogeneity of Variances

Bees: Captive and maltreated bees

boxM: Box's M-test

coefplot: Coefficient plots for Multivariate Linear Models

colDevs: Calculate column deviations from central values

covEllipses: Draw classical and robust covariance ellipses for one or more...

cqplot: Chi Square Quantile-Quantile plots

cross3d: Draw a 3D cross in an rgl scene

Diabetes: Diabetes Dataset

ellipse3d.axes: Draw axes of a 3D ellipsoid

etasq: Measures of Partial Association (Eta-squared) for Linear...

FootHead: Head measurements of football players

gsorth: Orthogonalize successive columns of a data frame or matrix

Headache: Treatment of Headache Sufferers for Sensitivity to Noise

heplot: Two-Dimensional HE Plots

heplot1d: One-Dimensional HE Plots

heplot3d: Three-Dimensional HE Plots

heplot-package: Visualizing Hypothesis Tests in Multivariate Linear Models

heplots-internal: Internal heplots functions

Hernior: Recovery from Elective Herniorrhaphy

interpPlot: Plot an Interpolation Between Two Related Data Sets

label.ellipse: Label an ellipse

leveneTests: Levene Tests of Homogeneity of Variances

logdetCI: Calculate confidence interval for log determinant of...

Mahalanobis: Classical and Robust Mahalanobis Distances

mark.H0: Mark a point null hypothesis in an HE plot

MockJury: Effects Of Physical Attractiveness Upon Mock Jury Decisions

NeuroCog: Neurocognitive Measures in Psychiatric Groups

NLSY: National Longitudinal Survey of Youth Data

Oslo: Oslo Transect Subset Data

pairs.mlm: Pairwise HE Plots

Parenting: Father Parenting Competance

Plastic: Plastic Film Data

plot.boxM: Plot for Box's M test and generalizations

plot.robmlm: Plot observation weights from a robust multivariate linear...

Pottery2: Chemical Analysis of Romano-British Pottery

Probe: Response Speed in a Probe Experiment

RatWeight: Weight Gain in Rats Exposed to Thiouracil and Thyroxin

ReactTime: Reaction Time Data

robmlm: Robust Fitting of Multivariate Linear Models

Rohwer: Rohwer Data Set

RootStock: Growth of Apple Trees from Different Root Stocks

Sake: Taste Ratings of Japanese Rice Wine (Sake)

schooldata: School Data

Skulls: Egyptian Skulls

SocGrades: Grades in a Sociology Course

SocialCog: Social Cognitive Measures in Psychiatric Groups

statList: Calculate statistics for levels of factors

termMeans: Calculate Means for a Term in a Multivariate Linear Model

trans.colors: Make Colors Transparent

VocabGrowth: Vocabulary growth data

WeightLoss: Weight Loss Data

Functions

AddHealth Man page
Adopted Man page
arrow3d Man page
bartlettTests Man page
Bees Man page
boxM Man page
boxM.default Man page
boxM.formula Man page
boxM.lm Man page
coefplot Man page
coefplot.mlm Man page
colDevs Man page
colMeansList Man page
covEllipses Man page
covEllipses.boxM Man page
covEllipses.data.frame Man page
covEllipses.default Man page
covEllipses.matrix Man page
covList Man page
cqplot Man page
cqplot.default Man page
cqplot.mlm Man page
cross3d Man page
Diabetes Man page
ellipse3d.axes Man page
etasq Man page
etasq.Anova.mlm Man page
etasq.lm Man page
etasq.mlm Man page
FootHead Man page
gsorth Man page
Headache Man page
heplot Man page
heplot1d Man page
heplot1d.mlm Man page
heplot3d Man page
heplot3d.mlm Man page
heplot.mlm Man page
heplots Man page
heplots-package Man page
he.rep Man page
Hernior Man page
HLT.crit Man page
interpPlot Man page
label.ellipse Man page
lambda.crit Man page
last Man page
leveneTests Man page
logdetCI Man page
Mahalanobis Man page
mark.H0 Man page
MockJury Man page
NeuroCog Man page
NLSY Man page
Oslo Man page
pairs.mlm Man page
Parenting Man page
Plastic Man page
plot.boxM Man page
plot.robmlm Man page
Pottery2 Man page
print.robmlm Man page
print.summary.robmlm Man page
Probe Man page
Probe1 Man page
Probe2 Man page
RatWeight Man page
ReactTime Man page
robmlm Man page
robmlm.default Man page
robmlm.formula Man page
Rohwer Man page
RootStock Man page
Roy.crit Man page
Sake Man page
schooldata Man page
Skulls Man page
SocGrades Man page
SocialCog Man page
statList Man page
summary.boxM Man page
summary.robmlm Man page
termInfo Man page
termMeans Man page
trans.colors Man page
vcov.mlm Man page
VocabGrowth Man page
WeightLoss Man page

Files

heplots/.Rinstignore
heplots/DESCRIPTION
heplots/NAMESPACE
heplots/NEWS
heplots/R
heplots/R/Mahalanobis.R heplots/R/arrow3d.R heplots/R/bartlettTests.R heplots/R/boxM.R heplots/R/coefplot.mlm.R heplots/R/colDevs.R heplots/R/covEllipses.R heplots/R/cqplot.R heplots/R/cross3d.R heplots/R/ellipse3d.axes.R heplots/R/etasq.R heplots/R/gsorth.R heplots/R/heplot.R heplots/R/heplot1d.R heplots/R/heplot3d.R heplots/R/interpPlot.R heplots/R/label.ellipse.R heplots/R/leveneTests.R heplots/R/logdetCI.R heplots/R/mark.H0.R heplots/R/pairs.mlm.R heplots/R/plot.boxM.R heplots/R/plot.robmlm.R heplots/R/robmlm.R heplots/R/statList.R heplots/R/termInfo.R heplots/R/termMeans.R heplots/R/trans.colors.R heplots/R/utility-car.R heplots/R/utility.R
heplots/build
heplots/build/vignette.rds
heplots/data
heplots/data/AddHealth.RData
heplots/data/Adopted.RData
heplots/data/Bees.rda
heplots/data/Diabetes.RData
heplots/data/FootHead.rda
heplots/data/Headache.RData
heplots/data/Hernior.RData
heplots/data/MockJury.RData
heplots/data/NLSY.RData
heplots/data/NeuroCog.RData
heplots/data/Oslo.RData
heplots/data/Parenting.RData
heplots/data/Plastic.rda
heplots/data/Pottery2.RData
heplots/data/Probe1.RData
heplots/data/Probe2.RData
heplots/data/RatWeight.RData
heplots/data/ReactTime.RData
heplots/data/Rohwer.rda
heplots/data/RootStock.rda
heplots/data/Sake.RData
heplots/data/Skulls.RData
heplots/data/SocGrades.RData
heplots/data/SocialCog.RData
heplots/data/VocabGrowth.rda
heplots/data/WeightLoss.RData
heplots/data/schooldata.RData
heplots/demo
heplots/demo/00Index
heplots/demo/Big5.R
heplots/demo/HE-other.R
heplots/demo/OBK.R
heplots/demo/bees.contrasts.R
heplots/inst
heplots/inst/CITATION
heplots/inst/doc
heplots/inst/doc/HE-examples.R
heplots/inst/doc/HE-examples.Rnw
heplots/inst/doc/HE-examples.pdf
heplots/inst/doc/repeated.R
heplots/inst/doc/repeated.Rnw
heplots/inst/doc/repeated.pdf
heplots/man
heplots/man/AddHealth.Rd heplots/man/Adopted.Rd heplots/man/Bees.Rd heplots/man/Diabetes.Rd heplots/man/FootHead.Rd heplots/man/Headache.Rd heplots/man/Hernior.Rd heplots/man/Mahalanobis.Rd heplots/man/MockJury.Rd heplots/man/NLSY.Rd heplots/man/NeuroCog.Rd heplots/man/Oslo.Rd heplots/man/Parenting.Rd heplots/man/Plastic.Rd heplots/man/Pottery2.Rd heplots/man/Probe.Rd heplots/man/RatWeight.Rd heplots/man/ReactTime.Rd heplots/man/Rohwer.Rd heplots/man/RootStock.Rd heplots/man/Sake.Rd heplots/man/Skulls.Rd heplots/man/SocGrades.Rd heplots/man/SocialCog.Rd heplots/man/VocabGrowth.Rd heplots/man/WeightLoss.Rd heplots/man/arrow3d.Rd heplots/man/bartlettTests.Rd heplots/man/boxM.Rd heplots/man/coefplot.Rd heplots/man/colDevs.Rd heplots/man/covEllipses.Rd heplots/man/cqplot.Rd heplots/man/cross3d.Rd heplots/man/ellipse3d.axes.Rd heplots/man/etasq.Rd heplots/man/gsorth.Rd heplots/man/heplot-package.Rd heplots/man/heplot.Rd heplots/man/heplot1d.Rd heplots/man/heplot3d.Rd heplots/man/heplots-internal.Rd heplots/man/interpPlot.Rd heplots/man/label.ellipse.Rd heplots/man/leveneTests.Rd heplots/man/logdetCI.Rd heplots/man/mark.H0.Rd heplots/man/pairs.mlm.Rd heplots/man/plot.boxM.Rd heplots/man/plot.robmlm.Rd heplots/man/robmlm.Rd heplots/man/schooldata.Rd heplots/man/statList.Rd heplots/man/termMeans.Rd heplots/man/trans.colors.Rd
heplots/vignettes
heplots/vignettes/HE-examples.Rnw
heplots/vignettes/HE-examples.bib
heplots/vignettes/fig
heplots/vignettes/fig/plot-Ortho-fm1.pdf
heplots/vignettes/fig/plot-Ortho-fm3.pdf
heplots/vignettes/fig/plot-grades-can-class.pdf
heplots/vignettes/fig/plot-grades-can-gpa.pdf
heplots/vignettes/fig/plot-grades-can-sex.pdf
heplots/vignettes/fig/plot-grades-mod3-pairs.pdf
heplots/vignettes/fig/plot-grades-pairs.pdf
heplots/vignettes/fig/plot-hern-can-age.pdf
heplots/vignettes/fig/plot-hern-can-build.pdf
heplots/vignettes/fig/plot-hern-can-cardiac.pdf
heplots/vignettes/fig/plot-hern-can-pstat.pdf
heplots/vignettes/fig/plot-hern-pairs.pdf
heplots/vignettes/fig/plot-jury-can1.pdf
heplots/vignettes/fig/plot-jury-can1a.pdf
heplots/vignettes/fig/plot-jury-mod1-HE.pdf
heplots/vignettes/fig/plot-jury-mod1-pairs.pdf
heplots/vignettes/fig/plot-jury-mod2-HE.pdf
heplots/vignettes/fig/plot-jury-mod3-eff.pdf
heplots/vignettes/fig/plot-jury.can1.pdf
heplots/vignettes/fig/plot-obk-HE1.pdf
heplots/vignettes/fig/plot-obk-HE2.pdf
heplots/vignettes/fig/plot-obk-HE3.pdf
heplots/vignettes/fig/plot-obk2-HE1.pdf
heplots/vignettes/fig/plot-obk2-HE2.pdf
heplots/vignettes/fig/plot-ortho-HE.pdf
heplots/vignettes/fig/plot-ortho-nonlin-HE.pdf
heplots/vignettes/fig/plot-ortho-xyplot1.pdf
heplots/vignettes/fig/plot-ortho-xyplot2.pdf
heplots/vignettes/fig/plot-plastic1.pdf
heplots/vignettes/fig/plot-plastic2.pdf
heplots/vignettes/fig/plot-rohwer-HE1.pdf
heplots/vignettes/fig/plot-rohwer-HE2.pdf
heplots/vignettes/fig/plot-rohwer-HE3.pdf
heplots/vignettes/fig/plot-rohwer-HE4.pdf
heplots/vignettes/fig/plot-skulls-HE-pairs.pdf
heplots/vignettes/fig/plot-skulls-bwplot.pdf
heplots/vignettes/fig/plot-skulls-can2.pdf
heplots/vignettes/fig/plot-skulls4.pdf
heplots/vignettes/fig/plot-voc1.pdf
heplots/vignettes/fig/plot-voc4.pdf
heplots/vignettes/fig/plot-voc8.pdf
heplots/vignettes/fig/plot-wl-HE1.pdf
heplots/vignettes/fig/plot-wl-HE2.pdf
heplots/vignettes/fig/plot-wl-HE3.pdf
heplots/vignettes/fig/plot-wl-means.pdf
heplots/vignettes/fig/rohwer-HE3D.pdf
heplots/vignettes/grades-HE3D.png
heplots/vignettes/plastic1-HE3D.jpg
heplots/vignettes/plot-plastic1.pdf
heplots/vignettes/repeated.Rnw
heplots/vignettes/repeated.bib
heplots/vignettes/rohwer-HE3D.png
heplots/vignettes/skulls.jpg

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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All documentation is copyright its authors; we didn't write any of that.