Man pages for hypergsplines
Bayesian model selection with penalised splines and hyper-g prior

aggregateModelsTableAggregate the models found by exhaustive or stochastic search
calculateModelCalculate intermediate information for a specific model
checkModelConfigsCheck coherency of model configurations with data
CustomGPriorConstructor for the custom g-prior class
CustomGPrior-classThe custom g-prior class
dinvGammaDensity function for the inverse gamma distribution
empiricalHpdConstruct an empirical HPD interval from samples
exhaustiveEvaluate all possible models
expWithConstExponentiate a vector of values plus a constant
getBmaSamplesGet posterior samples from the Bayesian Model Average (BMA)
getComputationCollect the computation options
getFamilyHelper function for glmModelData: Extracts an S3 family...
getFitSamplesExtract fit samples on linear predictor scale from posterior...
getFunctionSamplesExtract function values samples from posterior coefficients...
getInclusionProbsExtract posterior inclusion probabilities from the models...
getLogModelPriorGet the log prior probability for a model
getMcmcCollect the MCMC options
getQmatrixCompute the Q matrix necessary for the offsets for survival...
getRhosCompute the penalty parameters corresponding to degrees of...
getSamplesGet posterior samples for a specific model configuration
getSearchCollect the search options, todo: really use this in the...
glmGetSamplesGet posterior samples for a specific model configuration for...
glmModelDataProcess the data needed for modelling
GPrior-classThe virtual g-prior class
hyp2f1Gauss hypergeometric function
HypergnPriorConstructor for the "HypergnPrior" class
HypergnPrior-classThe hyper-g/n prior class
HypergnPrior-initializeInitialization method for the "HypergnPrior" class
HypergPriorConstructor for the hyper-g prior class
HypergPrior-classThe hyper-g prior class
HypergPrior-initializeInitialization method for the "HypergPrior" class
hypergsplines-packageBayesian model selection with penalized splines and hyper-g...
InvGammaGPriorConstructor for the inverse gamma g-prior class
InvGammaGPrior-classThe inverse gamma g-prior class
InvGammaGPrior-initializeInitialization method for the "InvGammaGPrior" class
is.boolPredicate checking for a boolean option
is.posIntPredicate checking for a scalar positive integer
is.scalarPredicate checking for a scalar
linApproxDensTest the C++ object class LinApproxDens
logBFhypergnCompute the log Bayes Factor against the null model under...
logHyp2f1LaplaceLaplace approximation to the Gauss hypergeometric function
makeBasisConstruction of quantile-based linear spline basis
modelDataProcess the data needed for modelling
pinvGammaCumulative distribution function for the inverse gamma...
plotCurveEstimatePlot function value estimates
postOptimizePost-optimizing a good model
qinvGammaQuantile function for the inverse gamma distribution
rinvGammaGenerate random numbers from the inverse gamma distribution
rshrinkageSample from the model-specific posterior of the shrinkage...
scrBesagSimultaneous credible band computation
scrHpdCalculate an SCB from a samples matrix
stochSearchStochastic search for models with high posterior probability
survModelDataProcess the data needed for survival models
hypergsplines documentation built on May 2, 2019, 6:14 p.m.