Description Usage Arguments Details Author(s) Examples
Plot signal and breakpoints with segment-level signal estimates
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dat |
A |
breakpoints |
A vector of breakpoints positions, or a |
regNames |
Region labels, a vector of length |
exclNames |
A vector of column names corresponding to columns that should not be plotted. |
ylabs |
A vector of 'y' labels (column names or indices) that should be plotted. |
ylims |
An optional 2*d matrix with |
binExclPattern |
A vector of column names or indices in |
col |
Color of plotting symbol, see |
pch |
Plotting symbol, see |
cex |
Magnification factor for plotting symbol, see |
Argument 'binCols' is mainly used to avoid calculating mean levels for allelic ratios, which would not make sense are they are typically multimodal.
Morgane Pierre-Jean and Pierre Neuvial
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