adjpval: Simulated adjusted p-values

Description Usage Format Details References Examples

Description

The adjusted p-values provided here result from the following procedure: 1) simulation of two RNA-seq experiments with four replicates in each condition via the sim.function, 2) analysis of differentially expressed tags using the DESeq package.

Usage

1

Format

List of length 2, where each list is a vector containing the adjusted p-values for 14,456 genes from individual differential analyses (obtained using DESeq v1.8.3) of each of the simulated RNA-seq datasets.

Details

It is possible to reproduce these adjusted p-values using the procedure described in the package vignette.

References

A. Rau, G. Marot and F. Jaffrezic (2014). Differential meta-analysis of RNA-seq data. BMC Bioinformatics 15:91

Examples

1
2
data(adjpval)
## Maybe str(adjpval)

metaRNASeq documentation built on Sept. 30, 2021, 3 p.m.