npde: Normalised prediction distribution errors for nonlinear mixed-effect models
Version 1.2

Routines to compute normalised prediction distribution errors, a metric designed to evaluate non-linear mixed effect models such as those used in pharmacokinetics and pharmacodynamics

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AuthorEmmanuelle Comets, Karl Brendel, France Mentre.
Date of publicationNone
MaintainerEmmanuelle Comets <emmanuelle.comets@inserm.fr>
LicenseGPL (>= 2)
Version1.2
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("npde", repos="http://R-Forge.R-project.org")

Man pages

dist.pred.sim: Compute distribution of pd/npde using simulations
gof.test: Test on npde or pd
kurtosis: Kurtosis
npde: Compute normalised prediction distribution errors
npde.cens.method: Method used to handle censored data
npdeControl: Set options for an NpdeObject
npdeData: Creates a NpdeData object
NpdeData-class: Class "NpdeData" representing the structure of the...
npde.decorrel.method: Method used to decorrelate vectors
npde.graphs: Save the graphs for a NpdeObject object to a file
NpdeObject-class: Class "NpdeObject"
npde-package: Normalised prediction distribution errors for nonlinear...
NpdeRes-class: Class "NpdeRes"
npde.save: Save the results contained in a NpdeObject object to a file
NpdeSimData-class: Class "NpdeSimData" representing the structure of the...
plot.NpdeData: Plots a NpdeData object
plot.NpdeObject: Plots a NpdeObject object
plot.NpdeRes: Plots a NpdeRes object
set.npde.plotoptions: Set graph options
showall: Brief summary of an object
simtheopp: Simulated data for the computation of normalised prediction...
skewness: Skewness
theopp: Pharmacokinetics of theophylline

Functions

NpdeData Man page
NpdeData-class Man page
NpdeObject Man page
NpdeObject-class Man page
NpdeObject-class, Man page
NpdeRes Man page
NpdeRes-class Man page
NpdeRes-class, Man page
NpdeSimData Man page
NpdeSimData-class Man page
[,NpdeData-method Man page
[,NpdeObject-method Man page
[,NpdeRes-method Man page
[,NpdeSimData-method Man page
[<-,NpdeData-method Man page
[<-,NpdeObject-method Man page
[<-,NpdeRes-method Man page
[<-,NpdeSimData-method Man page
autonpde Man page Source code
aux.plot.dist Source code
aux.plot.hist Source code
aux.scatter Source code
aux.scatter.box Source code
calcnpde Source code
calcnpde.sim Man page Source code
check.control.options Man page Source code
colsort Source code
compute.bands Source code
compute.bands.true Source code
compute.ploq Source code
compute.vpc.pi Source code
computenpde Source code
computenpde.loq Source code
computenpde.omit Source code
computepd Source code
computepd.cdf Source code
computepd.omit Source code
computepd.replace Source code
decorr.chol Source code
decorr.inverse Source code
decorr.polar Source code
default.npde.plots Source code
dist.pred.sim Man page Source code
gof.test Man page Source code
gof.test.NpdeObject Man page Source code
gof.test.NpdeRes Man page Source code
gof.test.numeric Man page Source code
kurtosis Man page Source code
linesort Source code
npde Man page Source code
npde-package Man page
npde.binning Source code
npde.cens.method Man page
npde.decorrel.method Man page
npde.graphs Man page
npde.graphs,NpdeObject Man page
npde.graphs,NpdeObject-method Man page
npde.main Source code
npde.main,NpdeObject Man page
npde.main.NpdeObject Source code
npde.plot.covariates Source code
npde.plot.data Source code
npde.plot.dist Source code
npde.plot.loq Source code
npde.plot.npde Source code
npde.plot.pd Source code
npde.plot.scatter Source code
npde.plot.select Source code
npde.plot.vpc Source code
npde.save Man page
npde.save,NpdeObject Man page
npde.save,NpdeObject-method Man page
npdeControl Man page Source code
npdeData Man page Source code
npdeSimData Source code
onLoad Source code
pdemenu Source code
plot,NpdeObject Man page
plot.NpdeData Man page Source code
plot.NpdeObject Man page Source code
plot.NpdeRes Man page Source code
print,NpdeData-method Man page
print,NpdeObject-method Man page
print,NpdeRes-method Man page
print.NpdeData Source code
print.NpdeObject Source code
print.NpdeSimData Source code
print.gof.test Man page Source code
replace.control.options Man page Source code
replace.npde.plotoptions Source code
set.npde.plotoptions Man page Source code
set.npde.plotoptions,NpdeData-method Man page
set.npde.plotoptions,NpdeObject-method Man page
set.npde.plotoptions.NpdeData Man page Source code
set.npde.plotoptions.NpdeObject Source code
show,NpdeData-method Man page
show,NpdeObject-method Man page
show,NpdeRes-method Man page
show,NpdeSimData-method Man page
showall Man page Source code
showall,NpdeData-method Man page
showall,NpdeObject-method Man page
showall,NpdeRes-method Man page
showall,NpdeSimData-method Man page
showall.NpdeData Man page Source code
showall.NpdeObject Man page Source code
showall.NpdeRes Man page
showall.NpdeSimData Man page Source code
simtheopp Man page
skewness Man page Source code
summary,NpdeData-method Man page
summary,NpdeObject-method Man page
summary,NpdeRes-method Man page
summary.NpdeData Source code
test,NpdeObject-method Man page
test,NpdeRes-method Man page
theopp Man page

Files

data
data/theopp.tab.gz
data/simtheopp.tab.gz
R
R/zzz.R
R/main.R
R/NpdeObject.R
R/global.R
R/func_methods.R
R/NpdeData.R
R/func_plots.R
R/NpdeRes.R
NAMESPACE
tests
tests/test_NpdePlots.R
tests/test_NpdeLib.R
inst
inst/npde_userguidev1.2.pdf
CHANGES
DESCRIPTION
man
man/npde.cens.method.Rd
man/npde.decorrel.method.Rd
man/NpdeRes-class.Rd
man/gof.test.Rd
man/skewness.Rd
man/npde-package.Rd
man/plot.NpdeObject.Rd
man/NpdeData-class.Rd
man/npde.graphs.Rd
man/npde.save.Rd
man/npdeData.Rd
man/showall.Rd
man/npde.Rd
man/simtheopp.Rd
man/kurtosis.Rd
man/theopp.Rd
man/plot.NpdeRes.Rd
man/npdeControl.Rd
man/set.npde.plotoptions.Rd
man/NpdeSimData-class.Rd
man/dist.pred.sim.Rd
man/plot.NpdeData.Rd
man/NpdeObject-class.Rd
npde documentation built on May 21, 2017, 1:20 a.m.