plantbreeding: Analysis and visualization of data from plant breeding and genetics experiments
Version 1.1.1

The package contains different functionalities relevant to analysis of data from both conventional and molecular plant breeding and genetics experiments.

Browse man pages Browse package API and functions Browse package files

AuthorUmesh R. Rosyara
Date of publication2014-12-15 04:16:43
MaintainerUmesh R. Rosyara <rosyara@wisc.edu>
LicenseGPL (>= 2)
Version1.1.1
URL https://r-forge.r-project.org/projects/plantbreeding/
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("plantbreeding", repos="http://R-Forge.R-project.org")

Man pages

adesign: Design Augmented Block Design experiment
ammi.full: Additive Main Effects and Multiplicative Interaction (AMMI)...
AUDPC.cal: Calculation of Area Under Disease / Pest Progress Curve
augblock: Augmented block data
aug.rcb: Analysis of augmented random block design
aug.rowcol: Analysis of Augmented row and column design
auugmentdesign: Randomization of augmented block design
carolina1: Analysis of North Carolina Design I
carolina2: Analysis of North Carolina design II
diallele1: Analysis of Diallel data
fulldial: Full 8 x 8 diallel data
linetester: Line x Tester analysis data
line.tester: Line x Tester Analysis
manhatton.plot: Manhattan plot of p-values
multienv: Multi- evironment data
multloc: Multi-location data
northcaro1: North Carolia Design I
northcaro2: North Carolina Design II
plantbreeding-package: Analysis of data from plant breeding and genetics experiments
rowcoldata: Analysis of Row Column Experimental Design Data
seletion.index: Construction of selection index
selindex: Data for selection index
stability: Stability analysis based on Eberhart and Russell (1966) model

Functions

AUDPC.cal Man page Source code
adesign Man page Source code
ammi.full Man page Source code
aug.rcb Man page Source code
aug.rowcol Man page Source code
augblock Man page
auugmentdesign Man page Source code
carolina1 Man page Source code
carolina2 Man page Source code
diallele1 Man page Source code
fulldial Man page
gencor.lm Source code
line.tester Man page Source code
linetester Man page
manhatton.plot Man page Source code
multienv Man page
multloc Man page
northcaro1 Man page
northcaro2 Man page
plantbreeding Man page
plantbreeding-package Man page
rowcoldata Man page
seletion.index Man page Source code
selindex Man page
stability Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/AUDPC.cal.r
R/adesign.R
R/ammi.full.r
R/aug.rcb.R
R/aug.rowcol.R
R/auugmentdesign.R
R/carolina1.R
R/carolina2.r
R/diallele1.r
R/gencor.lm.R
R/line.tester.R
R/manhatton.plot.r
R/seletion.index.R
R/stability.R
data
data/augblock.rda
data/fulldial.rda
data/linetester.rda
data/multienv.rda
data/multloc.rda
data/northcaro1.rda
data/northcaro2.rda
data/rowcoldata.rda
data/selindex.rda
man
man/AUDPC.cal.Rd
man/adesign.Rd
man/ammi.full.Rd
man/aug.rcb.Rd
man/aug.rowcol.Rd
man/augblock.Rd
man/auugmentdesign.Rd
man/carolina1.Rd
man/carolina2.Rd
man/diallele1.Rd
man/fulldial.Rd
man/line.tester.Rd
man/linetester.Rd
man/manhatton.plot.rd
man/multienv.Rd
man/multloc.Rd
man/northcaro1.Rd
man/northcaro2.Rd
man/plantbreeding-package.Rd
man/rowcoldata.Rd
man/seletion.index.Rd
man/selindex.Rd
man/stability.Rd
plantbreeding documentation built on May 21, 2017, 12:48 a.m.