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plsgenomics: PLS Analyses for Genomics
Routines for PLS-based genomic analyses, implementing PLS methods for classification with microarray data and prediction of transcription factor activities from combined ChIP-chip analysis. The >=1.2-1 versions include two new classification methods for microarray data: GSIM and Ridge PLS. The >=1.3 versions includes a new classification method combining variable selection and compression in logistic regression context: RIRLS-SPLS; and an adaptive version of the sparse PLS.
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Package details |
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| Author | Anne-Laure Boulesteix <boulesteix@ibe.med.uni-muenchen.de>, Ghislain Durif <ghislain.durif@univ-lyon1.fr>, Sophie Lambert-Lacroix <Sophie.Lambert@imag.fr>, Julie Peyre <Julie.Peyre@imag.fr>, and Korbinian Strimmer <strimmer@uni-leipzig.de>. |
| Maintainer | Ghislain Durif <ghislain.durif@univ-lyon1.fr> |
| License | GPL (>= 2) |
| Version | 1.3-1 |
| URL | http://cran.r-project.org/web/packages/plsgenomics/index.html |
| Package repository | View on R-Forge |
| Installation |
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