SHM_main: Runs SHM C code

In qfaBayes: Tools for modelling the growth dynamics of arrays of large numbers of colonies and performing quantitative fitness analysis (QFA).

Description

For use with SHM post processed Colonyzer output. Runs SHM C code

Usage

SHM_main(burn,iters,thin,adaptive_phase,QFA.I,QFA.y,QFA.x,
  QFA.NoORF,QFA.NoTIME,PRIORS,TUNING)

Arguments

burn	Burn-in period
iters	Number of iterations in final sample
thin	Amount of thinning
adaptive_phase	Total length of adaptive phase within burn in period
QFA.I	QFA.I
QFA.y	QFA.y
QFA.x	QFA.x
QFA.NoORF	QFA.NoORF
QFA.NoTIME	QFA.NoTIME
PRIORS	PRIORS
TUNING	TUNING

Value

SHM output

qfaBayes documentation built on May 2, 2019, 4:12 p.m.