API for rPlant
R interface to the Agave and Foundation API

Global functions
Check	Man page Source code
CheckJobStatus	Man page Source code
Clustal	Man page
ClustalW	Man page Source code
CompareNames	Man page Source code
Copy	Source code
CopyDir	Man page Source code
CopyFile	Man page Source code
Create_Keys	Source code
DNA.fasta	Man page
Delete	Source code
DeleteALL	Source code
DeleteDir	Man page Source code
DeleteFile	Man page Source code
DeleteJob	Man page Source code
DeleteOne	Source code
Error	Man page Source code
FaST_LMM	Man page Source code
FastTree	Man page
Fasttree	Man page Source code
GetAppInfo	Man page Source code
GetJobHistory	Man page Source code
GetPhylotasticToken	Man page Source code
KillJob	Man page Source code
ListApps	Man page
ListDir	Man page Source code
ListJobOutput	Man page Source code
Mafft	Man page Source code
MakeDir	Man page Source code
Move	Source code
MoveDir	Man page Source code
MoveFile	Man page Source code
Muscle	Man page Source code
PHYLIP_Pars	Man page Source code
PLINK	Man page Source code
PLINKConversion	Man page Source code
PROTEIN.fasta	Man page
Pems	Source code
PermissionsDir	Man page Source code
PermissionsFile	Man page Source code
RAXML	Man page
RAxML	Man page Source code
Raxml	Man page
Rename	Source code
RenameDir	Man page Source code
RenameFile	Man page Source code
Renew	Man page Source code
RenewToken	Man page Source code
ResolveNames	Man page Source code
RetrieveJob	Man page Source code
RetrieveOne	Source code
RetrieveTNRSNames	Man page Source code
Share	Source code
ShareDir	Man page Source code
ShareFile	Man page Source code
SubmitJob	Man page Source code
SupportFile	Man page Source code
TNRS	Man page
TestApp	Man page Source code
Time	Man page Source code
UploadFile	Man page Source code
Validate	Man page Source code
Wait	Man page Source code
appINFO	Man page Source code
clustal	Man page
fasttree	Man page
find.input	Man page Source code
geno_test.tfam	Man page
geno_test.tped	Man page
rPlant	Man page
raxml	Man page
rplant	Man page
rplant-package	Man page