get.colony.data: This function creates a data object from the Colony2 outputs.
In rcolony: Tools for implementation and visualisation of Colony2 and its outputs.

Description Usage Arguments Value Author(s) References See Also Examples

When provided with the directory name, and the name of the *.DAT colony input file, this function creates a list object containing pertinent information from the Colony output files.

1	get.colony.data(datadir, filename, colonyVersion)

`datadir`	The path to the directory that contains the Colony output files and the *.DAT Colony input file.
`filename`	Optional. The name of the Colony input file. If this argument is omitted, the command will search for a *.DAT file in the data directory (datadir) and use that as the input file.
`colonyVersion`	The version of Colony that was used (default is 2.0, other option is 2.0.3).

A list, containing data extracted from the Colony output files

Owen R. Jones

http://www.zoo.cam.ac.uk/ioz/software.htm#COLONY

run.colony, build.colony.input

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#Not run
#mynewdata<-get.colony.data("/Users/FredBlogs/Documents/Example/")
#mynewdata<-get.colony.data("/Users/FredBlogs/Documents/Example/","Example1.DAT")

rcolony documentation built on May 2, 2019, 6:42 p.m.