Description Usage Arguments Value Examples
View source: R/call_tile_reg.r
For a HiDRA dataset on a given chromosome, this function calls tile regions (the regions covered by at least one read).
1 |
data |
A data.frame for a HiDRA dataset for one chromosome. The data.frame must contain four columns: 'start', 'end', 'PLASMID', 'RNA', and is sorted by 'start'. |
tile_reg: A list containing the row ids in the data for each tiled region.
size: The number of reads in each tiled region.
num_r: The total number of tiled regions.
1 2 | data(hidra_ex)
tiled <- call_tile_reg(hidra_ex)
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