find_reg: find_reg

In sharpr2: Estimating Regulatory Scores and Identifying ATAC-STARR Data

Description

Given an object from sharpr2 and a position, this function finds the tiled region containing the position.

Usage

find_reg(re,pos)

Arguments

re	An object obtained from sharpr2.
pos	A position for which the tiled region is searched.

Value

ind: the index of the tiled region in the object from sharpr2. If no such tile region is found, NA is returned.

Examples

data(hidra_ex)
re <- sharpr2(hidra_ex[1:2000,], l_min = 150, l_max = 600, f_dna = 5, f_rna = 0, sig=FALSE)
find_reg(re,1000000)

sharpr2 documentation built on May 2, 2019, 6:47 p.m.