plotSoilRelationChordGraph: Vizualize Soil Relationships via Chord Diagram.

Description Usage Arguments Details Author(s) References See Also Examples

View source: R/plotSoilRelationChordGraph.R

Description

Plot a soil relationship diagram using a chord diagram.

Usage

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plotSoilRelationChordGraph(m, s, mult = 2, base.color = "grey", 
highlight.colors = c("RoyalBlue", "DarkOrange", "DarkGreen"), 
add.legend = TRUE, ...)

Arguments

m

an adjacency matrix, no NA allowed

s

soil of interest, must exist in the column or row names of m

mult

multiplier used to re-scale data in m associated with s

base.color

color for all soils other than s and 1st and 2nd most commonly co-occuring

highlight.colors

vector of 3 colors: soil of interest, 1st most common, 2nd most common

add.legend

logical, add a legend

...

additional arguments passed to circlize::chordDiagramFromMatrix

Details

This function is experimental. Documentation pending. See http://jokergoo.github.io/circlize/ for ideas.

Author(s)

D.E. Beaudette

References

https://github.com/jokergoo/circlize

See Also

plotSoilRelationGraph

Examples

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## Not run: 
data(amador)
m <- component.adj.matrix(amador)
plotSoilRelationChordGraph(m, 'amador')

## End(Not run)

sharpshootR documentation built on May 31, 2017, 2:05 a.m.