Description Usage Arguments Details Value Author(s) See Also
computes Kulczynski similarity matrix for biclusters in two bicluster sets
1 | kulczynskiMat(x, y, type=c("rows", "cols", "both"))
|
x |
BiclustSet object containing row and column indicators of bicluster membership, number of biclusters |
y |
BiclustSet object containing row and column indicators of bicluster membership, number of biclusters |
type |
whether to compute Kulczynski index in two dimensions, row dimension or column dimension |
This function operates on BiclustSet objects and computes pairwise similarity based on the common elements between biclusters. Kulczynski similarity score ku for two biclusters A and B is computed as
ku = 2|A\cap B|≤ft(\frac{1}{|A|} + \frac{1}{|B|}\right)
matrix of pairwise Kulczynski indices
Tatsiana Khamiakova
similarity
,jaccardMat
, ochiaiMat
, sensitivityMat
,
specificityMat
,sorensenMat
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