hclusterPlot: heatmap generation
In ABarray: Microarray QA and statistical data analysis for Applied Biosystems Genome Survey Microrarray (AB1700) gene expression data.
Description
Usage
Arguments
Details
Value
Author(s)
Description
plot clustering heatmap using correlation
Usage
1
hclusterPlot(expr, title, dist)
Arguments
expr
matrix of gene expression value
title
the title for the plot
dist
whether to use correlation or distance for clustering,
default to use Euclidean distance. Use dist = "Correlation" to
cluster with correlation coefficient
Details
generating heatmap using correlation as distance
Value
None. heatmap will be generated.
Author(s)
Y Andrew Sun
ABarray documentation built on Nov. 8, 2020, 5:25 p.m.
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Description Usage Arguments Details Value Author(s)
Description
plot clustering heatmap using correlation
Usage
1 | hclusterPlot(expr, title, dist)
|
Arguments
expr |
matrix of gene expression value |
title |
the title for the plot |
dist |
whether to use correlation or distance for clustering, default to use Euclidean distance. Use dist = "Correlation" to cluster with correlation coefficient |
Details
generating heatmap using correlation as distance
Value
None. heatmap will be generated.
Author(s)
Y Andrew Sun
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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