Man pages for ARRmNormalization
Adaptive Robust Regression normalization for Illumina methylation data
| ARRmNormalization-internal | Internal ARRmNormalization Functions |
| ARRmNormalization-package | ARRm normalization for Illumina methylation data |
| getBackground | Estimate background intensity from the negative control... |
| getCoefficients | Return the coefficients from the ARRm linear model |
| getDesignInfo | Build the chip and position indices |
| getQuantiles | Return the percentiles of a betaMatrix for each probe type |
| normalizeARRm | Perform ARRm normalization |
| positionPlots | Plots to evalue chip position effects on different... |
| ProbesType | Probe Design information for the 450k methylation assay |
| quantilePlots | Diagnostic plots for evaluation of background effects and dye... |
