writeEset: Writes the expression data matrix of an ExpressionSet object...

In AgiMicroRna: Processing and Differential Expression Analysis of Agilent microRNA chips

Description

Writes the expression data matrix of an ExpressionSet object in a file.

Usage

writeEset(eset, ddPROC, targets,verbose=FALSE)

Arguments

eset	An Expression object, normally containing the procesed data
ddPROC	An RGList object, normally containing the processed data
targets	data.frame with the targets structure
verbose	logical, if TRUE prints out output

Details

Writes the expression data matrix of an ExpressionSet object in a file.

Author(s)

Pedro Lopez-Romero

See Also

An 'RGList' example containing proccesed data is in ddPROC and an overview of how the processed data is produced is given in filterMicroRna. The ExpressionSet object can be generated using esetMicroRna

Examples

## Not run: 
data(ddPROC)
data(targets.micro)
esetPROC=esetMicroRna(ddPROC,targets.micro,makePLOT=TRUE,verbose=FALSE)
writeEset(esetPROC,ddPROC,targets.micro,verbose=TRUE)

## End(Not run)

AgiMicroRna documentation built on Nov. 8, 2020, 5:25 p.m.