plot_webgl: Plot a dataset into a HTML file

In AlpsNMR: Automated spectraL Processing System for NMR

Description

Uses WebGL for performance

Usage

plot_webgl(nmr_dataset, html_filename, ...)

Arguments

nmr_dataset	An nmr_dataset_1D
html_filename	The output HTML filename to be created
...	Arguments passed on to plot.nmr_dataset_1D x a nmr_dataset_1D object chemshift_range range of the chemical shifts to be included. Can be of length 3 to include the resolution in the third element (e.g. c(0.2, 0.8, 0.005)) NMRExperiment A character vector with the NMRExperiments to include. Use "all" to include all experiments. quantile_plot If TRUE plot the 10\ If two numbers between 0 and 1 are given then a custom percentile can be plotted quantile_colors A vector with the colors for each of the quantiles interactive if TRUE return an interactive plotly plot, otherwise return a ggplot one.

Value

the html filename created

See Also

Other nmr_dataset_1D functions: [.nmr_dataset_1D(), computes_peak_width_ppm(), file_lister(), files_to_rDolphin(), format.nmr_dataset_1D(), is.nmr_dataset_1D(), load_and_save_functions, new_nmr_dataset_1D(), nmr_align_find_ref(), nmr_baseline_removal(), nmr_baseline_threshold(), nmr_exclude_region(), nmr_integrate_regions(), nmr_interpolate_1D(), nmr_meta_add(), nmr_meta_export(), nmr_meta_get_column(), nmr_meta_get(), nmr_normalize(), nmr_pca_build_model(), nmr_pca_outliers_filter(), nmr_pca_outliers_plot(), nmr_pca_outliers_robust(), nmr_pca_outliers(), nmr_ppm_resolution(), plot.nmr_dataset_1D(), print.nmr_dataset_1D(), rdCV_PLS_RF_ML(), rdCV_PLS_RF(), save_files_to_rDolphin(), to_ChemoSpec(), validate_nmr_dataset_peak_table(), validate_nmr_dataset()

Examples

dir_to_demo_dataset <- system.file("dataset-demo", package = "AlpsNMR")
#dataset <- nmr_read_samples_dir(dir_to_demo_dataset)
#dataset_1D <- nmr_interpolate_1D(dataset, axis = c(min = -0.5, max = 10, by = 2.3E-4))
#html_plot <- plot_webgl(dataset_1D, "html_plot.html")

AlpsNMR documentation built on April 1, 2021, 6:02 p.m.