AnnotationDbi
Manipulation of SQLite-based annotations in Bioconductor

Package index
Search the AnnotationDbi package
Vignettes
Functions
810
Source code
54
Man pages
25
Home
/
Bioconductor
/
AnnotationDbi: Manipulation of SQLite-based annotations in Bioconductor
/
API

API for AnnotationDbi
Manipulation of SQLite-based annotations in Bioconductor

Global functions
$,Bimap-method Man page
.Bimap.summary Source code
.GOid2go_synonymField Source code
.GOid2go_termField Source code
.GetLKeyLength Source code
.GetUniqueLKeys Source code
.L2Rchain.toString Source code
.UCToStandard Source code
.addRevMapSeeds Source code
.adjustForDupColNames Source code
.alignAnnList Source code
.appendGenesToTabs Source code
.attachDB Source code
.attachDBs Source code
.attachGO Source code
.attachKEGG Source code
.attach_supporting_pkg Source code
.checkForDeprecatedKeytype Source code
.checkKeys Source code
.checkKeysAreWellFormed Source code
.chooseJoinType Source code
.cleanup Source code
.collateInpQueryResults Source code
.collateInpQueryResults8 Source code
.collateQueryResults Source code
.cols Source code
.contextualizeColnames Source code
.convertGOtoGO2ALL Source code
.dbUniqueMappedKeys.SQLresultname Source code
.dbUniqueVals.SQLresultname Source code
.definePossibleTables Source code
.defineTables Source code
.deprecatedColsMessage Source code
.deriveTableNameFromField Source code
.doubleBracketSub Source code
.dropUnwantedRows Source code
.exists Source code
.expandCols Source code
.extractData Source code
.extractWithSimpleInpQuery Source code
.extractWithSimpleInpQuery8 Source code
.extractWithSimpleQuery Source code
.filterDeprecatedKeytypes Source code
.filterSuffixes Source code
.formatList Source code
.from.colpos Source code
.fromCol Source code
.generateExtraRows Source code
.generateQuery Source code
.get Source code
.getBaseFiveCode Source code
.getBaseShortCode Source code
.getBaseSpecies Source code
.getBaseSpecies8 Source code
.getCentralID Source code
.getChipDbFile Source code
.getDBLoc Source code
.getDBLocs Source code
.getDataTables Source code
.getInpTables Source code
.getInpTables8 Source code
.getLCcolnames Source code
.getLCcolnames8 Source code
.getMappingData Source code
.getMetaValue Source code
.getOrgPkg Source code
.getTable Source code
.getTableNames Source code
.getTableNames8 Source code
.getTables Source code
.getaltDBs Source code
.handleMultipleMatches Source code
.hasMultiProbes Source code
.hasSingleProbes Source code
.inpCols Source code
.inpCols8 Source code
.inslot.Lkeys Source code
.inslot.Rkeys Source code
.is.submap Source code
.isSingleString Source code
.key.summary Source code
.keys Source code
.keysInp Source code
.keysInp8 Source code
.keysReact Source code
.kosherPkg Source code
.legacyCols Source code
.legacyKeys Source code
.legacySelect Source code
.listDeprecatedKeytypes Source code
.ls Source code
.make0rowDataFrame Source code
.makeFiveLetterMapping Source code
.makeSQL Source code
.makeSQLchunks Source code
.makeShortNameMapping Source code
.mangleDBName Source code
.noSchemaCols Source code
.noSchemaKeys Source code
.noSchemaSelect Source code
.normalize.direction Source code
.queryForKeys Source code
.reLabel Source code
.replaceValues Source code
.resortColumns Source code
.revmapper Source code
.sample Source code
.select Source code
.selectInp Source code
.selectInp8 Source code
.selectReact Source code
.selectWarnInp Source code
.selectWarnReact Source code
.simplifyCols Source code
.tagCol Source code
.taxonomyId Source code
.test Source code
.testForValidCols Source code
.testForValidKeys Source code
.testGOFrame Source code
.testKEGGFrame Source code
.to.colpos Source code
.toCol Source code
.toListOfLists Source code
.toSQLStringSet Source code
.toSQLWhere Source code
.toggleFilter Source code
.valid.colnames Source code
.valid.metadata.table Source code
.valid.table.colnames Source code
.warnAboutManyToOneRelationships Source code
ACCNUM Man page
ACYRTHOSIPHON_PISUM Man page
AEDES_AEGYPTI Man page
ALIAS Man page
ANOPHELES_GAMBIAE Man page
APIS_MELLIFERA Man page
ARABIDOPSIS_THALIANA Man page
ARACYC Man page
ARACYCENZYME Man page
ASPERGILLUS_FUMIGATUS Man page
AgiAnnDbMap Man page
AgiAnnDbMap-class Man page
AnnDbBimap Man page
AnnDbBimap-class Man page
AnnDbMap Man page
AnnDbMap-class Man page
AnnDbObj Man page
AnnDbObj-class Man page
AnnDbObj-objects Man page
AnnDbPkg-checker Man page
AnnObj Man page
AnnObj-class Man page
AnnotationDb Man page Source code
AnnotationDb-class Man page
BATRACHOCHYTRIUM_DENDROBATIDIS Man page
BOMBYX_MORI Man page
BOS_TAURUS Man page
BRANCHIOSTOMA_FLORIDAE Man page
BRUGIA_MALAYI Man page
Bimap Man page Man page
Bimap-class Man page
Bimap-direction Man page
Bimap-envirAPI Man page
Bimap-keys Man page
Bimap-toTable Man page
BimapFormatting Man page
CAENORHABDITIS_BRENNERI Man page
CAENORHABDITIS_BRIGGSAE Man page
CAENORHABDITIS_ELEGANS Man page
CAENORHABDITIS_JAPONICA Man page
CAENORHABDITIS_REMANEI Man page
CANDIDA_ALBICANS Man page
CANDIDA_GLABRATA Man page
CANIS_FAMILIARIS Man page
CAPITELLA_SPI Man page
CAVIA_PORCELLUS Man page
CHLAMYDOMONAS_REINHARDTII Man page
CHR Man page
CHRLOC Man page
CHRLOCEND Man page
CIONA_INTESTINALIS Man page
CIONA_SAVIGNYI Man page
COCCIDIOIDES_IMMITIS Man page
COMMON Man page
COPRINOPSIS_CINEREUS Man page
CRYPTOCOCCUS_NEOFORMANS Man page
CRYPTOSPORIDIUM_HOMINIS Man page
CRYPTOSPORIDIUM_PARVUM Man page
CULEX_PIPIENS Man page
CYANIDIOSCHYZON_MEROLAE Man page
ChipDb-class Man page
DANIO_RERIO Man page
DAPHNIA_PULEX Man page
DEBARYOMYCES_HANSENII Man page
DEFINITION Man page
DESCRIPTION Man page
DICTYOSTELIUM_DISCOIDEUM Man page
DROSOPHILA_ANANASSAE Man page
DROSOPHILA_GRIMSHAWI Man page
DROSOPHILA_MELANOGASTER Man page
DROSOPHILA_MOJAVENSIS Man page
DROSOPHILA_PSEUDOOBSCURA Man page
DROSOPHILA_VIRILIS Man page
DROSOPHILA_WILLISTONI Man page
Definition Man page
Definition,GOTerms-method Man page
Definition,GOTermsAnnDbBimap-method Man page
Definition,character-method Man page
ENSEMBL Man page
ENSEMBLPROT Man page
ENSEMBLTRANS Man page
ENTAMOEBA_HISTOLYTICA Man page
ENTREZID Man page
ENZYME Man page
EQUUS_CABALLUS Man page
ESCHERICHIA_COLIK12 Man page
EVIDENCE Man page
EVIDENCEALL Man page
FUSARIUM_GRAMINEARUM Man page
FlatBimap Man page
FlatBimap-class Man page
GALLUS_GALLUS Man page
GASTEROSTEUS_ACULEATUS Man page
GENENAME Man page
GIARDIA_LAMBLIA Man page
GO Man page
GOALL Man page
GOAllFrame Man page Man page
GOAllFrame,GOFrame-method Man page
GOAllFrame-class Man page
GODb-class Man page
GOFrame Man page Man page
GOFrame,data.frame,character-method Man page
GOFrame,data.frame,missing-method Man page
GOFrame-class Man page
GOID Man page Man page
GOID,GOTerms-method Man page
GOID,GOTermsAnnDbBimap-method Man page
GOID,character-method Man page
GOTerms Man page Source code
GOTerms-class Man page
GOTermsAnnDbBimap Man page
GOTermsAnnDbBimap-class Man page
Go3AnnDbBimap Man page
Go3AnnDbBimap-class Man page
Go3tablenames Source code
GoAnnDbBimap Man page
GoAnnDbBimap-class Man page
HELOBDELLA_ROBUSTA Man page
INTERPRO Man page
IPI Man page
IXODES_SCAPULARIS Man page
InparanoidDb-class Man page
IpiAnnDbMap Man page
IpiAnnDbMap-class Man page
KEGGFrame Man page Man page
KEGGFrame,data.frame,character-method Man page
KEGGFrame,data.frame,missing-method Man page
KEGGFrame-class Man page
KLUYVEROMYCES_LACTIS Man page
L2Rchain.Lfilter Source code
L2Rchain.Lkeyname Source code
L2Rchain.Ltablename Source code
L2Rchain.Rattribnames Source code
L2Rchain.Rfilter Source code
L2Rchain.Rkeyname Source code
L2Rchain.Rtablename Source code
L2Rchain.colmetanames Source code
L2Rchain.colnames Source code
L2Rchain.rev Source code
L2Rchain.tagname Source code
L2Rlink Man page Source code
L2Rlink-class Man page
LEISHMANIA_MAJOR Man page
LOTTIA_GIGANTEA Man page
Lkeyname Man page
Lkeyname,AnnDbBimap-method Man page
Lkeyname,Bimap-method Man page
Lkeys Man page
Lkeys,AnnDbBimap-method Man page
Lkeys,FlatBimap-method Man page
Lkeys,ProbeAnnDbBimap-method Man page
Lkeys,ProbeAnnDbMap-method Man page
Lkeys,ProbeGo3AnnDbBimap-method Man page
Lkeys,ProbeIpiAnnDbMap-method Man page
Lkeys<- Man page
Lkeys<-,AnnDbBimap-method Man page
Lkeys<-,FlatBimap-method Man page
Llength Man page
Llength,AnnDbBimap-method Man page
Llength,Bimap-method Man page
Llength,ProbeAnnDbBimap-method Man page
Llength,ProbeAnnDbMap-method Man page
Llength,ProbeGo3AnnDbBimap-method Man page
Llength,ProbeIpiAnnDbMap-method Man page
MACACA_MULATTA Man page
MAGNAPORTHE_GRISEA Man page
MAP Man page
MONODELPHIS_DOMESTICA Man page
MONOSIGA_BREVICOLLIS Man page
MUS_MUSCULUS Man page
NASONIA_VITRIPENNIS Man page
NCBICHIP_DB_SeedGenerator Man page Source code
NCBIORG_DB_SeedGenerator Source code
NEMATOSTELLA_VECTENSIS Man page
NEUROSPORA_CRASSA Man page
OMIM Man page
ONTOLOGY Man page Man page
ONTOLOGYALL Man page
ORF Man page
ORNITHORHYNCHUS_ANATINUS Man page
ORYZA_SATIVA Man page
ORYZIAS_LATIPES Man page
OSTREOCOCCUS_TAURI Man page
Ontology Man page
Ontology,GOTerms-method Man page
Ontology,GOTermsAnnDbBimap-method Man page
Ontology,character-method Man page
OrgDb-class Man page
PAN_TROGLODYTES Man page
PATH Man page
PEDICULUS_HUMANUS Man page
PFAM Man page
PHYSCOMITRELLA_PATENS Man page
PHYTOPHTHORA_RAMORUM Man page
PHYTOPHTHORA_SOJAE Man page
PLASMODIUM_FALCIPARUM Man page
PLASMODIUM_VIVAX Man page
PMID Man page
PONGO_PYGMAEUS Man page
POPULUS_TRICHOCARPA Man page
PRISTIONCHUS_PACIFICUS Man page
PROBEID Man page
PROSITE Man page
PUCCINIA_GRAMINIS Man page
ProbeAnnDbBimap Man page
ProbeAnnDbBimap-class Man page
ProbeAnnDbMap Man page
ProbeAnnDbMap-class Man page
ProbeGo3AnnDbBimap Man page
ProbeGo3AnnDbBimap-class Man page
ProbeIpiAnnDbMap Man page
ProbeIpiAnnDbMap-class Man page
RATTUS_NORVEGICUS Man page
REFSEQ Man page
RHIZOPUS_ORYZAE Man page
Rattribnames Man page
Rattribnames,AnnDbBimap-method Man page
Rattribnames,Bimap-method Man page
Rattribnames<- Man page
Rattribnames<-,AnnDbBimap-method Man page
Rattribnames<-,FlatBimap-method Man page
Rattribnames<-,Go3AnnDbBimap-method Man page
ReactomeDb-class Man page
Rkeyname Man page
Rkeyname,AnnDbBimap-method Man page
Rkeyname,Bimap-method Man page
Rkeys Man page
Rkeys,AnnDbBimap-method Man page
Rkeys,AnnDbMap-method Man page
Rkeys,FlatBimap-method Man page
Rkeys,Go3AnnDbBimap-method Man page
Rkeys<- Man page
Rkeys<-,AnnDbBimap-method Man page
Rkeys<-,FlatBimap-method Man page
Rlength Man page
Rlength,AnnDbBimap-method Man page
Rlength,AnnDbMap-method Man page
Rlength,Bimap-method Man page
Rlength,Go3AnnDbBimap-method Man page
SACCHAROMYCES_CEREVISIAE Man page
SCHISTOSOMA_MANSONI Man page
SCHIZOSACCHAROMYCES_POMBE Man page
SCLEROTINIA_SCLEROTIORUM Man page
SGD Man page
SMART Man page
SORGHUM_BICOLOR Man page
STAGONOSPORA_NODORUM Man page
STRONGYLOCENTROTUS_PURPURATUS Man page
SYMBOL Man page
Secondary Man page
Secondary,GOTerms-method Man page
Secondary,GOTermsAnnDbBimap-method Man page
Secondary,character-method Man page
Synonym Man page
Synonym,GOTerms-method Man page
Synonym,GOTermsAnnDbBimap-method Man page
Synonym,character-method Man page
TAIR Man page
TAKIFUGU_RUBRIPES Man page
TERM Man page
TETRAHYMENA_THERMOPHILA Man page
TETRAODON_NIGROVIRIDIS Man page
THALASSIOSIRA_PSEUDONANA Man page
THEILERIA_ANNULATA Man page
THEILERIA_PARVA Man page
TRIBOLIUM_CASTANEUM Man page
TRICHOMONAS_VAGINALIS Man page
TRICHOPLAX_ADHAERENS Man page
TRYPANOSOMA_CRUZI Man page
Term Man page
Term,GOTerms-method Man page
Term,GOTermsAnnDbBimap-method Man page
Term,character-method Man page
UNIGENE Man page
UNIPROT Man page
USTILAGO_MAYDIS Man page
XENOPUS_TROPICALIS Man page
YARROWIA_LIPOLYTICA Man page
[,Bimap-method Man page
[[,Bimap-method Man page
`L2Rchain.Rattribnames<-` Source code
addToNamespaceAndExport Source code
annoStartupMessages Source code
annotMessage Source code
as.character,AnnDbBimap-method Man page
as.character,FlatBimap-method Man page
as.data.frame,Bimap-method Man page
as.data.frame.Bimap Man page Source code
as.list Man page
as.list,AgiAnnDbMap-method Man page
as.list,Bimap-method Man page
as.list,FlatBimap-method Man page
as.list,GOTermsAnnDbBimap-method Man page
as.list,GoAnnDbBimap-method Man page
as.list,IpiAnnDbMap-method Man page
as.list.Bimap Man page Source code
attachDBs Source code
checkDBSCHEMA Source code
checkMAPCOUNTS Man page Source code
checkPROBE2GOmappings Source code
checkProperty0 Source code
chooseCentralOrgPkgSymbol Man page Source code
choosePackage Source code
class:AgiAnnDbMap Man page
class:AnnDbBimap Man page
class:AnnDbMap Man page
class:AnnDbObj Man page
class:AnnObj Man page
class:AnnotationDb Man page
class:Bimap Man page
class:FlatBimap Man page
class:GOAllFrame Man page
class:GOFrame Man page
class:GOTerms Man page
class:GOTermsAnnDbBimap Man page
class:Go3AnnDbBimap Man page
class:GoAnnDbBimap Man page
class:IpiAnnDbMap Man page
class:KEGGFrame Man page
class:L2Rlink Man page
class:ProbeAnnDbBimap Man page
class:ProbeAnnDbMap Man page
class:ProbeGo3AnnDbBimap Man page
class:ProbeIpiAnnDbMap Man page
colmetanames Man page
colmetanames,AnnDbBimap-method Man page
colmetanames,FlatBimap-method Man page
colnames Man page
colnames,AnnDbBimap-method Man page
colnames,FlatBimap-method Man page
cols Man page Source code
columns Man page
columns,AnnotationDb-method Man page
columns,ChipDb-method Man page
columns,GODb-method Man page
columns,Inparanoid8Db-method Man page
columns,InparanoidDb-method Man page
columns,OrgDb-method Man page
columns,ReactomeDb-method Man page
compareAnnDataIn2Pkgs Source code
contents,Bimap-method Man page
count.links Man page
count.links,Bimap-method Man page
count.links,Go3AnnDbBimap-method Man page
count.mappedLkeys Man page
count.mappedLkeys,AgiAnnDbMap-method Man page
count.mappedLkeys,AnnDbBimap-method Man page
count.mappedLkeys,Bimap-method Man page
count.mappedLkeys,Go3AnnDbBimap-method Man page
count.mappedRkeys Man page
count.mappedRkeys,AnnDbBimap-method Man page
count.mappedRkeys,AnnDbMap-method Man page
count.mappedRkeys,Bimap-method Man page
count.mappedRkeys,Go3AnnDbBimap-method Man page
count.mappedkeys Man page
count.mappedkeys,ANY-method Man page
count.mappedkeys,Bimap-method Man page
createAnnDbBimap Source code
createAnnDbBimaps Source code
createAnnObjs Source code
createAnnObjs.ANOPHELESCHIP_DB Source code
createAnnObjs.ANOPHELES_DB Source code
createAnnObjs.ARABIDOPSISCHIP_DB Source code
createAnnObjs.ARABIDOPSIS_DB Source code
createAnnObjs.BOVINECHIP_DB Source code
createAnnObjs.BOVINE_DB Source code
createAnnObjs.CANINECHIP_DB Source code
createAnnObjs.CANINE_DB Source code
createAnnObjs.CHICKENCHIP_DB Source code
createAnnObjs.CHICKEN_DB Source code
createAnnObjs.CHIMPCHIP_DB Source code
createAnnObjs.CHIMP_DB Source code
createAnnObjs.COELICOLORCHIP_DB Source code
createAnnObjs.COELICOLOR_DB Source code
createAnnObjs.ECOLICHIP_DB Source code
createAnnObjs.ECOLI_DB Source code
createAnnObjs.FLYCHIP_DB Source code
createAnnObjs.FLY_DB Source code
createAnnObjs.GO_DB Source code
createAnnObjs.HUMANCHIP_DB Source code
createAnnObjs.HUMAN_DB Source code
createAnnObjs.INPARANOID_DB Source code
createAnnObjs.KEGG_DB Source code
createAnnObjs.MALARIACHIP_DB Source code
createAnnObjs.MALARIA_DB Source code
createAnnObjs.MOUSECHIP_DB Source code
createAnnObjs.MOUSE_DB Source code
createAnnObjs.NCBI_DB Source code
createAnnObjs.ORGANISM_DB Source code
createAnnObjs.PFAM_DB Source code
createAnnObjs.PIGCHIP_DB Source code
createAnnObjs.PIG_DB Source code
createAnnObjs.RATCHIP_DB Source code
createAnnObjs.RAT_DB Source code
createAnnObjs.RHESUSCHIP_DB Source code
createAnnObjs.RHESUS_DB Source code
createAnnObjs.SchemaChoice Man page Source code
createAnnObjs.WORMCHIP_DB Source code
createAnnObjs.WORM_DB Source code
createAnnObjs.XENOPUSCHIP_DB Source code
createAnnObjs.XENOPUS_DB Source code
createAnnObjs.YEASTCHIP_DB Source code
createAnnObjs.YEASTNCBI_DB Source code
createAnnObjs.YEAST_DB Source code
createAnnObjs.ZEBRAFISHCHIP_DB Source code
createAnnObjs.ZEBRAFISH_DB Source code
createAnnObjs.reactome Source code
createCHRLENGTHS Source code
createMAPCOUNTS Source code
createORGANISMSeeds Source code
createREJECTORF Source code
createSimpleBimap Man page Source code
dbAttach Source code
dbCountRawAnnDbMapRows Source code
dbCountRowsFromL2Rchain Source code
dbCountUniqueMappedKeys Source code
dbCountUniqueVals Source code
dbEasyQuery Source code
dbFileConnect Man page Source code
dbFileDisconnect Man page Source code
dbGetTable Man page Source code
dbInfo Man page
dbInfo,AnnDbObj-method Man page
dbInfo,DBIConnection-method Man page
dbInfo,environment-method Man page
dbObjectName Source code
dbQuery Source code
dbRawAnnDbMapToTable Source code
dbSelectFromL2Rchain Source code
dbUniqueMappedKeys Source code
dbUniqueVals Source code
dbconn Man page
dbconn,AnnDbObj-method Man page
dbconn,AnnotationDb-method Man page
dbconn,SQLiteConnection-method Man page
dbconn,environment-method Man page
dbfile Man page
dbfile,AnnDbObj-method Man page
dbfile,AnnotationDb-method Man page
dbfile,SQLiteConnection-method Man page
dbfile,environment-method Man page
dbmeta Man page
dbmeta,AnnDbObj-method Man page
dbmeta,DBIConnection-method Man page
dbmeta,environment-method Man page
dbschema Man page
dbschema,AnnDbObj-method Man page
dbschema,DBIConnection-method Man page
dbschema,environment-method Man page
debugSQL Man page Source code
dim,Bimap-method Man page
direction Man page
direction,AnnDbBimap-method Man page
direction,FlatBimap-method Man page
direction<- Man page
direction<-,AnnDbBimap-method Man page
direction<-,AnnDbMap-method Man page
direction<-,FlatBimap-method Man page
eapply Man page
eapply,Bimap-method Man page
exists Man page
exists,ANY,ANY,Bimap-method Man page
exists,ANY,Bimap,missing-method Man page
exposeAllProbes Man page
exposeAllProbes,AnnDbBimap-method Man page
filterSeeds Man page Source code
flatten.GO2PROBEenvir Source code
flatten.GOenvir Source code
get Man page
get,ANY,ANY,Bimap-method Man page
get,ANY,Bimap,missing-method Man page
getBimapFilters Man page
getBimapFilters,AnnDbBimap-method Man page
getDBMaps Source code
getGOFrameData Man page
getGOFrameData,GOAllFrame-method Man page
getGOFrameData,GOFrame-method Man page
getKEGGFrameData Man page
getKEGGFrameData,KEGGAllFrame-method Man page
getKEGGFrameData,KEGGFrame-method Man page
getOrgPkgForSchema Man page Source code
getSpeciesFromSchema Source code
hasMultiProbes Man page
hasMultiProbes,ProbeAnnDbBimap-method Man page
hasMultiProbes,ProbeAnnDbMap-method Man page
hasMultiProbes,ProbeGo3AnnDbBimap-method Man page
hasMultiProbes,ProbeIpiAnnDbMap-method Man page
hasSingleProbes Man page
hasSingleProbes,ProbeAnnDbBimap-method Man page
hasSingleProbes,ProbeAnnDbMap-method Man page
hasSingleProbes,ProbeGo3AnnDbBimap-method Man page
hasSingleProbes,ProbeIpiAnnDbMap-method Man page
head,FlatBimap-method Man page
idConverter Man page Source code
identical.collections Source code
identical.uulists Source code
initialize,FlatBimap-method Man page
initialize,GOTerms-method Man page
initialize,L2Rlink-method Man page
inpIDMapper Man page Source code
intraIDMapper Man page Source code
isNA Man page
isNA,ANY-method Man page
isNA,Bimap-method Man page
isNA,environment-method Man page
keyname Man page
keyname,Bimap-method Man page
keys Man page Man page
keys,AnnotationDb-method Man page
keys,Bimap-method Man page
keys,ChipDb-method Man page
keys,GODb-method Man page
keys,Inparanoid8Db-method Man page
keys,InparanoidDb-method Man page
keys,OrgDb-method Man page
keys,ReactomeDb-method Man page
keys<- Man page
keys<-,Bimap-method Man page
keytypes Man page
keytypes,ChipDb-method Man page
keytypes,GODb-method Man page
keytypes,Inparanoid8Db-method Man page
keytypes,InparanoidDb-method Man page
keytypes,OrgDb-method Man page
keytypes,ReactomeDb-method Man page
length,Bimap-method Man page
links Man page
links,AnnDbBimap-method Man page
links,Bimap-method Man page
links,FlatBimap-method Man page
links,Go3AnnDbBimap-method Man page
loadDb Man page Source code
ls Man page
ls,Bimap-method Man page
make.name.tree Source code
makeAnnDbBiMapSeed Source code
makeFlatBimapUsingSelect Source code
makeGOGraph Man page Source code
makeGo3AnnDbBiMapSeed Source code
makeGo3L2Rchain Source code
makeSeedList Source code
make_eg_to_go_map Man page Source code
make_go_to_eg_map Man page Source code
mapIds Man page
mapIds,AnnotationDb-method Man page
mapIds_base Man page Source code
mappedLkeys Man page
mappedLkeys,AgiAnnDbMap-method Man page
mappedLkeys,AnnDbBimap-method Man page
mappedLkeys,FlatBimap-method Man page
mappedLkeys,Go3AnnDbBimap-method Man page
mappedLkeysIsNotAvailable Source code
mappedRkeys Man page
mappedRkeys,AnnDbBimap-method Man page
mappedRkeys,AnnDbMap-method Man page
mappedRkeys,FlatBimap-method Man page
mappedRkeys,Go3AnnDbBimap-method Man page
mappedkeys Man page
mappedkeys,Bimap-method Man page
mappedkeys,environment-method Man page
mappedkeys,vector-method Man page
maskMultiProbes Man page
maskMultiProbes,AnnDbBimap-method Man page
maskSingleProbes Man page
maskSingleProbes,AnnDbBimap-method Man page
mergeToNamespaceAndExport Man page Source code
metadata,AnnotationDb-method Man page
mget Man page
mget,ANY,Bimap-method Man page
mget,Bimap-method Man page
names,AnnotationDb-method Man page
ncol Man page
ncol,Bimap-method Man page
nhit Man page
nhit,Bimap-method Man page
nhit,environment-method Man page
nhit,list-method Man page
nrow Man page
nrow,AnnDbBimap-method Man page
nrow,AnnDbTable-method Man page
nrow,Bimap-method Man page
nrow,FlatBimap-method Man page
nrow,Go3AnnDbBimap-method Man page
orgPackageName Man page
prefixAnnObjNames Source code
print.probetable Man page Source code
resort_base Man page Source code
revmap Man page
revmap,AnnDbBimap-method Man page
revmap,Bimap-method Man page
revmap,environment-method Man page
revmap,list-method Man page
sample Man page
sample,Bimap-method Man page
sample,environment-method Man page
saveDb Man page
saveDb,AnnotationDb-method Man page
select Man page
select,AnnotationDb-method Man page
select,ChipDb-method Man page
select,GODb-method Man page
select,Inparanoid8Db-method Man page
select,InparanoidDb-method Man page
select,OrgDb-method Man page
select,ReactomeDb-method Man page
setInpBimapFilter Man page
setInpBimapFilter,InpAnnDbBimap-method Man page
show,AnnDbBimap-method Man page
show,AnnDbTable-method Man page
show,AnnotationDb-method Man page
show,FlatBimap-method Man page
show,GOTerms-method Man page
show,L2Rlink-method Man page
showQCData Man page Source code
smartKeys Source code
species Man page
species,AnnotationDb-method Man page
subset,AnnDbBimap-method Man page
subset,Bimap-method Man page
summary,AnnDbBimap-method Man page
summary,Bimap-method Man page
tagname Man page
tagname,AnnDbBimap-method Man page
tagname,Bimap-method Man page
tail,FlatBimap-method Man page
taxonomyId Man page
taxonomyId,AnnotationDb-method Man page
testForValidKeytype Man page Source code
testSelectArgs Man page Source code
toSQLStringSet Man page
toTable Man page
toTable,Bimap-method Man page
toTable,FlatBimap-method Man page
toggleProbes Man page
toggleProbes,ProbeAnnDbBimap-method Man page
toggleProbes,ProbeAnnDbMap-method Man page
toggleProbes,ProbeGo3AnnDbBimap-method Man page
toggleProbes,ProbeIpiAnnDbMap-method Man page
unlist2 Man page Source code
AnnotationDbi documentation built on Nov. 8, 2020, 4:50 p.m.

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close