format-methods: Methods for formatting BASiCS_Result and BASiCS_ResultsDE...

In BASiCS: Bayesian Analysis of Single-Cell Sequencing data

Description

Methods for formatting BASiCS_Result and BASiCS_ResultsDE objects.

Usage

## S4 method for signature 'BASiCS_ResultsDE'
format(x, Parameter, Filter = TRUE, ProbThreshold = NULL, ...)

## S4 method for signature 'BASiCS_ResultDE'
format(x, Filter = TRUE, ProbThreshold = NULL, ...)

## S4 method for signature 'BASiCS_ResultVG'
format(x, Filter = TRUE, ProbThreshold = NULL, ...)

Arguments

x	Object being subsetted.
Parameter	Character scalar indicating which of the BASiCS_Result should be formatted.
Filter	Logical scalar indicating whether results should be filtered based on differential expression or HVG/LVG status if ProbThreshold=NULL, or a probability threshold if ProbThreshold=NULL
ProbThreshold	Probability threshold to be used if Filter=TRUE
...	Passed to format.

Value

A data.frame.

BASiCS documentation built on April 16, 2021, 6 p.m.