BGmix: Bayesian models for differential gene expression

Fully Bayesian mixture models for differential gene expression

AuthorAlex Lewin, Natalia Bochkina
Date of publicationNone
MaintainerAlex Lewin <a.m.lewin@imperial.ac.uk>
LicenseGPL-2
Version1.34.0

View on Bioconductor

Functions

BGmix Man page
BGmix-package Man page
calcFDR Man page
ccParams Man page
ccPred Man page
ccSummary Man page
ccTrace Man page
EstimatePi0 Man page
FDRforTailPP Man page
FDRplotTailPP Man page
histTailPP Man page
plotBasic Man page
plotCompare Man page
plotFDR Man page
plotMixDensity Man page
plotPredChecks Man page
plotTrace Man page
readBGX Man page
ss Man page
TailPP Man page
ybar Man page

Files

BGmix/.BBSoptions
BGmix/DESCRIPTION
BGmix/NAMESPACE
BGmix/R
BGmix/R/BGmix.R BGmix/R/EstimatePi0.R BGmix/R/FDRforTailPP.R BGmix/R/FDRplotTailPP.R BGmix/R/SimulateFromNull.R BGmix/R/TailPP.R BGmix/R/TailPPCalculate.R BGmix/R/calcF0tail.R BGmix/R/calcFDR.R BGmix/R/ccParams.R BGmix/R/ccPred.R BGmix/R/ccSummary.R BGmix/R/ccTrace.R BGmix/R/fitBGmix.R BGmix/R/histTailPP.R BGmix/R/plotBasic.R BGmix/R/plotCompare.R BGmix/R/plotFDR.R BGmix/R/plotMixDensity.R BGmix/R/plotPredChecks.R BGmix/R/plotTrace.R BGmix/R/readBGX.R BGmix/R/summaryTailPP.R
BGmix/boostIncl.tar.gz
BGmix/build
BGmix/build/vignette.rds
BGmix/configure
BGmix/configure.ac
BGmix/configure.win
BGmix/data
BGmix/data/ss.R
BGmix/data/ybar.R
BGmix/inst
BGmix/inst/doc
BGmix/inst/doc/BGmix.R
BGmix/inst/doc/BGmix.Rnw
BGmix/inst/doc/BGmix.pdf
BGmix/man
BGmix/man/BGmix-package.Rd BGmix/man/BGmix.Rd BGmix/man/EstimatePi0.Rd BGmix/man/FDRforTailPP.Rd BGmix/man/FDRplotTailPP.Rd BGmix/man/TailPP.Rd BGmix/man/calcFDR.Rd BGmix/man/ccParams.Rd BGmix/man/ccPred.Rd BGmix/man/ccSummary.Rd BGmix/man/ccTrace.Rd BGmix/man/histTailPP.Rd BGmix/man/plotBasic.Rd BGmix/man/plotCompare.Rd BGmix/man/plotFDR.Rd BGmix/man/plotMixDensity.Rd BGmix/man/plotPredChecks.Rd BGmix/man/plotTrace.Rd BGmix/man/readBGX.Rd BGmix/man/ss.Rd BGmix/man/ybar.Rd
BGmix/src
BGmix/src/BGmix_main.cpp
BGmix/src/BGmix_main.h
BGmix/src/Makevars
BGmix/src/Makevars.in
BGmix/src/Makevars.win
BGmix/src/rand.hh
BGmix/src/rundir.cpp
BGmix/src/rundir.hh
BGmix/src/updates_BGmix.cpp
BGmix/src/updates_BGmix.h
BGmix/vignettes
BGmix/vignettes/BGmix.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.