Description Usage Arguments Author(s) Examples

Histograms and q-q plots of predictive p-values for the mixture prior. Separate plots are given for each mixture component, using only genes with high posterior probability of being classified into the relevant component.

1 | ```
plotPredChecks(pvals, pc, probz = 0.8, label = "", breaks = 20)
``` |

`pvals` |
matrix of predictive p-values output by 'ccPred' (NB, not the whole list object, just the matrix of p-values) |

`pc` |
matrix of posterior classification probabilities output by 'ccParams' (NB, not the whole list object, just the matrix of probabilities) |

`probz` |
threshold on posterior probabilities for including genes in each mixture component plot |

`label` |
title used on histograms |

`breaks` |
argument input to histogram |

Alex Lewin

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