read_chrom_size: Read genome chromosome sizes file
In BPRMeth: Model higher-order methylation profiles
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
read_chrom_size reads a file containing genome chromosome
sizes using the fread function.
Usage
1
read_chrom_size(file, delimiter = "\t")
Arguments
file
File name
delimiter
Delimiter format the columns are splitted. Default is tab.
Value
A data.table object.
Author(s)
C.A.Kapourani C.A.Kapourani@ed.ac.uk
See Also
Examples
1
2
3
4
5
chr_file <- system.file("extdata", "hg19.chr.sizes", package = "BPRMeth")
chr_data <- read_chrom_size(chr_file)
# Extract the size of chr1
chr_data[1]
BPRMeth documentation built on Nov. 8, 2020, 5:54 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) See Also Examples
Description
read_chrom_size reads a file containing genome chromosome
sizes using the fread function.
Usage
1 | read_chrom_size(file, delimiter = "\t")
|
Arguments
file |
File name |
delimiter |
Delimiter format the columns are splitted. Default is tab. |
Value
A data.table object.
Author(s)
C.A.Kapourani C.A.Kapourani@ed.ac.uk
See Also
Examples
1 2 3 4 5 | chr_file <- system.file("extdata", "hg19.chr.sizes", package = "BPRMeth")
chr_data <- read_chrom_size(chr_file)
# Extract the size of chr1
chr_data[1]
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.