API for BUMHMM
Computational pipeline for computing probability of modification from structure probing experiment data
| Global functions | |
|---|---|
| .poolNucl | Source code |
| .scaleDOR | Source code |
| .selectNuclPos | Source code |
| .stabiliseVariance | Source code |
| betaParamsEM | Source code |
| betaParamsMStep | Source code |
| computeProbs | Man page Source code |
| computeStretches | Man page Source code |
| covFile | Man page |
| docFile | Man page |
| dorFile | Man page |
| findPatternPos | Man page Source code |
| hmmFwbw | Source code |
| nuclPerm | Man page Source code |
| scaleDOR | Man page Source code |
| se | Man page |
| selectNuclPos | Man page Source code |
| seq | Man page |
| stabiliseVariance | Man page Source code |
