BadRegionFinder is a package for identifying regions with a bad, acceptable and good coverage in sequence alignment data available as bam files. The whole genome may be considered as well as a set of target regions. Various visual and textual types of output are available.
|Bioconductor views||Alignment Classification Coverage Sequencing WholeGenome|
|Maintainer||Sarah Sandmann <[email protected]>|
|Package repository||View on Bioconductor|
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