clusterSitesToGR: A function to obtain a 'GRanges' object of CpG clusters from...

Description Usage Arguments Value Author(s) See Also Examples

View source: R/clusterSitesToGR.R

Description

This function allows to get the start and end positions of CpG clusters from a BSraw or BSrel object, when there is a cluster.id column in the rowRanges slot.

Usage

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Arguments

object

A BSraw or BSrel object with a cluster.id column in the rowRanges slot. Usually the output of clusterSites.

Value

An object of class GRanges is returned.

Author(s)

Katja Hebestreit

See Also

clusterSites

Examples

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data(rrbs)
rrbs.clustered <- clusterSites(rrbs)

clusterSitesToGR(rrbs.clustered)

BiSeq documentation built on Nov. 1, 2018, 2:25 a.m.