BioQC: Detect tissue heterogeneity in expression profiles with gene sets

BioQC performs quality control of high-throughput expression data based on tissue gene signatures. It can detect tissue heterogeneity in gene expression data. The core algorithm is a Wilcoxon-Mann-Whitney test that is optimised for high performance.

Package details

AuthorJitao David Zhang <>, Laura Badi, Gregor Sturm, Roland Ambs
Bioconductor views GeneExpression GeneSetEnrichment QualityControl StatisticalMethod
MaintainerJitao David Zhang <>
LicenseGPL (>=3)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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BioQC documentation built on Nov. 8, 2020, 7:16 p.m.