API for BiocCheck
Bioconductor-specific package checks

Global functions
BiocCheck Man page Source code
BiocCheckFromCommandLine Source code
Context Source code
checkBBScompatibility Source code
checkBiocViews Source code
checkCodingPractice Source code
checkDeprecatedPackages Source code
checkDescriptionNamespaceConsistency Source code
checkEnv Source code
checkExportsAreDocumented Source code
checkForBadDepends Source code
checkForBiocDevelSubscription Source code
checkForDirectSlotAccess Source code
checkForLibraryMe Source code
checkForPromptComments Source code
checkForSupportSiteRegistration Source code
checkForValueSection Source code
checkForVersionNumberMismatch Source code
checkFormatting Source code
checkFunctionLengths Source code
checkImportSuggestions Source code
checkIndivFileSizes Source code
checkInstContents Source code
checkIsPackageAlreadyInRepo Source code
checkIsVignetteBuilt Source code
checkLibraryCalls Source code
checkNEWS Source code
checkNewPackageVersionNumber Source code
checkRVersionDependency Source code
checkRegistrationOfEntryPoints Source code
checkSkipOnBioc Source code
checkToolsVig Source code
checkUnitTests Source code
checkVersionNumber Source code
checkVigBuilder Source code
checkVigChunkEval Source code
checkVigDirExists Source code
checkVigEngine Source code
checkVigTemplate Source code
checkVignetteDir Source code
cleanupDependency Source code
colonWalker Source code
debug Source code
docType Source code
doesFileLoadPackage Source code
doesManPageHaveRunnableExample Source code
findSymbolInParsedCode Source code
getAllDependencies Source code
getArgParser Source code
getBadDeps Source code
getFunctionLengths Source code
getMaintainerEmail Source code
getOptionList Source code
getParent Source code
getPkgType Source code
getVigBuilder Source code
getVigSources Source code
get_package_dir Source code
get_package_name Source code
handleCheck Source code
handleContext Source code
handleError Source code
handleMessage Source code
handleNote Source code
handleVerbatim Source code
handleWarning Source code
installAndLoad Source code
isInfrastructurePackage Source code
msg Source code
mungeName Source code
nstallScript Source code
old.checkExportsAreDocumented Source code
onLoad Source code
parseFile Source code
parseFiles Source code
printf Source code
sScriptInstalled Source code
stop Source code
usage Man page Source code
verbatim Source code
vigHelper Source code
zeroCounters Source code
BiocCheck documentation built on May 2, 2018, 3:16 a.m.