getRefinedModel: Refinement of Parameters of cFL model

Description Usage Arguments Details Value Author(s) See Also

View source: R/getRefinedModel.R

Description

Performs refinement of cFL model parameters

Usage

1
getRefinedModel(res,CNOlist,cutModel, cutSimList, refParams)

Arguments

res

Optimum returned by gaDiscreteT1

CNOlist

a CNOlist on which the score is based (based on valueSignals[[2]], i.e. data at T1)

cutModel

Model (with unnesssary edges cut in reduceFuzzy or interpretDiscreteGA

cutSimList

Fields for simulation based on cutModel (again, cut with reduceFuzzy or interpretDiscreteGA)

refParams

parameter list object as returned by defaultParametersFuzzy.

Details

After the discreteGA chooses transfer functions from a discrete set of transfer functions and removing interactions inconsistent with the data, this function 'refines' the parameters by using optim to go to the local minimum of error to data

Value

refModel

A refined model

finalSet

Set of final fuzzy parameter

MSE

The MSE value

Author(s)

M.K. Morris

See Also

gaDiscreteT1, reduceFuzzy, interpretDiscreteGA


CNORfuzzy documentation built on Nov. 1, 2018, 2:23 a.m.