API for CRISPRseek
Design of target-specific guide RNAs in CRISPR-Cas9, genome-editing systems

Global functions
CRISPRseek Man page
CRISPRseek-package Man page
annotateOffTargets Man page Source code
buildFeatureVectorForScoring Man page Source code
buildFeatureVectorForScoring2 Source code
calculategRNAEfficiency Man page Source code
calculategRNAEfficiency2 Source code
compare2Sequences Man page Source code
compute_pair_index Source code
compute_pair_index2 Source code
compute_pair_index3 Source code
filterOffTarget Man page Source code
filtergRNAs Man page Source code
findgRNAs Man page Source code
getOfftargetScore Man page Source code
getOfftargetScore2 Source code
getSeqFromBed Source code
getgRNA.cut.sites Source code
isPatternUnique Man page Source code
mismatches_as_IntegerList Source code Source code
offTargetAnalysis Man page Source code
preprocess_me2 Source code
searchHits Man page Source code
searchHits2 Man page Source code
searchHitsInOneSeq2 Source code
searchHitsInOneSeq3 Source code
translatePattern Man page Source code
uniqueREs Man page Source code
writeHits Man page Source code
writeHits2 Man page Source code
CRISPRseek documentation built on Nov. 1, 2018, 4:21 a.m.