Design of target-specific guide RNAs in CRISPR-Cas9, genome-editing systems

Global functions | |
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CRISPRseek | Man page |

CRISPRseek-package | Man page |

annotateOffTargets | Man page Source code |

buildFeatureVectorForScoring | Man page Source code |

buildFeatureVectorForScoring2 | Source code |

calculategRNAEfficiency | Man page Source code |

calculategRNAEfficiency2 | Source code |

compare2Sequences | Man page Source code |

compute_pair_index | Source code |

compute_pair_index2 | Source code |

compute_pair_index3 | Source code |

filterOffTarget | Man page Source code |

filtergRNAs | Man page Source code |

findgRNAs | Man page Source code |

getOfftargetScore | Man page Source code |

getOfftargetScore2 | Source code |

getSeqFromBed | Source code |

getgRNA.cut.sites | Source code |

isPatternUnique | Man page Source code |

mismatches_as_IntegerList | Source code Source code |

offTargetAnalysis | Man page Source code |

preprocess_me2 | Source code |

searchHits | Man page Source code |

searchHits2 | Man page Source code |

searchHitsInOneSeq2 | Source code |

searchHitsInOneSeq3 | Source code |

translatePattern | Man page Source code |

uniqueREs | Man page Source code |

writeHits | Man page Source code |

writeHits2 | Man page Source code |

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