API for CellBench
Construct Benchmarks for Single Cell Analysis Methods

Global functions
.bp_try_apply Source code
.generate_tasks Source code
.get_cache Source code
.make_output Source code
.onLoad Source code
CellBench Man page
CellBench-package Man page
add_class Source code
all_length_one Source code
all_same_class Source code
all_unique Man page Source code
any_task_errors Man page Source code
any_task_errors.benchmark_tbl Man page Source code
apply_methods Man page Source code
apply_methods.benchmark_tbl Man page Source code
apply_methods.list Man page Source code
apply_methods.tbl_df Man page
apply_metrics Man page
arrow_sep Man page Source code
as_pipeline_list Man page Source code
ascii_arrow Source code
begin_benchmark Man page
cache_method Man page Source code
cellbench_case_study Man page Source code
cellbench_file Man page Source code
chain Source code
check_class Man page
clear_cached_datasets Man page Source code
clear_cellbench_cache Man page Source code
data_list Man page Source code
df_to_tasks Source code
drop_class Source code
duration_seconds Source code
factor_no_sort Source code
filter_zero_genes Man page Source code
fn_arg_seq Man page Source code
fn_list Man page Source code
get_data Source code
if_empty_then Source code
if_null_then Source code
infer_names_from_dots Source code
is.error Source code
is.task_error Man page Source code
is_all_of Man page Source code
is_any_of Man page
is_fn_list Source code
is_one_of Man page Source code
keep_high_count_cells Man page Source code
keep_high_count_genes Man page Source code
keep_high_var_genes Man page Source code
load_all_data Man page Source code
load_cell_mix_data Man page Source code
load_mrna_mix_data Man page Source code
load_sc_data Man page Source code
make_combinations Source code
mhead Man page Source code
pipeline_collapse Man page Source code
print.fn_arg_seq Man page Source code
print.task_error Man page Source code
sample_cells Man page Source code
sample_cols Source code
sample_genes Man page Source code
sample_rows Source code
sample_sce_data Man page
seq_ncol Source code
seq_nrow Source code
set_cellbench_bpparam Man page Source code
set_cellbench_cache_path Man page Source code
set_cellbench_threads Man page Source code
simple_time Source code
strip_timing Man page Source code
strip_timing.benchmark_timing_tbl Man page Source code
summary.benchmark_tbl Man page Source code
suppressMsgAndPrint Source code
suppressPrint Source code
time_methods Man page Source code
time_methods.benchmark_timing_tbl Man page Source code
time_methods.list Man page Source code
unicode_arrow Source code
unpack_timing Man page Source code
unpack_timing.benchmark_timing_tbl Man page Source code
CellBench documentation built on Oct. 31, 2019, 3:53 a.m.