CNOlist is a class with a set of methods described here below.
Returns the cues (matrix) found in the
Returns the signals (list of matrices) found in the
Returns the cues found in the
Returns the inhibitors found in the
Returns the timepoints found in the
Returns the Variances (list of matrices) found in the
CNOlist. Will be different from zero only if replicates were found in the
MIDAS data. See
Set the signals. No sanity check!
convert the instance CNOlist into the old-style
makeCNOlist that is a list. Used in the ODE package.
returns length of CNOlist (number of time points)
randomizes the signals matrice in a CNOlist. See
randomizeCNOlist for details
prints summary information
plot the CNOlist instance using the plotCNOlist function.
signature(x="CNOlist", y="CNOlist"): Please see the
plotCNOlist2 for more details.
signature(object="CNOlist", filename="MIDAS-file"): reads measurement error corresponding to the data from the MIDAS file and updates the CNOlist object
signature(object="CNOlist", filename="string",overwrite=F): writes measurement error corresponding to the data from the CNOlist to a MIDAS file
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showClass("CNOlist") data(CNOlistToyMMB, package="CellNOptR") cnolist = CNOlistToyMMB # In version 1.3.30 and above, use the plot method instead of former plotCNOlist function. plot(cnolist) # In version 1.5.14 and above, use getters instead of the @ operator getCues(cnolist) # others: new_cnolist = randomize(cnolist)
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