CellTrails
Reconstruction, visualization and analysis of branching trajectories

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landmarks: GET landmarks

landmarks: GET landmarks
In CellTrails: Reconstruction, visualization and analysis of branching trajectories

Description Usage Arguments Details Value Author(s) See Also Examples

Description

Gets landmarks from a SingleCellExperiment object.

Usage

1
landmarks(object)

Arguments

object

A SingleCellExperiment object

Details

Trail branches (B) and heads (H) are automatically assigned; landmarks can also be defined on the trajectory by the user (U). Landmarks can be used to extract single trails from a trajectory.

Value

A character vector with sample names

Author(s)

Daniel C. Ellwanger

See Also

userLandmarks

Examples

1
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3
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5
# Example data
data(exSCE)

# Get landmarks
landmarks(exSCE)[seq_len(5)]

CellTrails documentation built on Nov. 8, 2020, 5:53 p.m.

Related to landmarks in CellTrails...

CellTrails index
README.md CellTrails: Reconstruction, visualization, and analysis of branching trajectories from single-cell expression data CellTrails: Reconstruction, visualization, and analysis of branching trajectories from single-cell expression data

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