latentSpace: GET CellTrails' latent space
In CellTrails: Reconstruction, visualization and analysis of branching trajectories
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Retrieve computed latent space from a SingleCellExperiment object.
Usage
1
latentSpace(object)
Arguments
object
A SingleCellExperiment object
Details
Returns the latent space set for a CellTrails analysis. The
resulting matrix is numeric. Rows are samples and columns are d
components. It is a wrapper for reducedDim to ensure
that the proper matrix is received from a SingleCellExperiment
object.
Value
An object of class matrix
Author(s)
Daniel C. Ellwanger
See Also
SingleCellExperiment reducedDim
Examples
1
2
3
4
5
# Example data
data(exSCE)
# Get latent space
latentSpace(exSCE)[seq_len(5), ]
CellTrails documentation built on Nov. 8, 2020, 5:53 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s) See Also Examples
Description
Retrieve computed latent space from a SingleCellExperiment object.
Usage
1 | latentSpace(object)
|
Arguments
object |
A |
Details
Returns the latent space set for a CellTrails analysis. The
resulting matrix is numeric. Rows are samples and columns are d
components. It is a wrapper for reducedDim to ensure
that the proper matrix is received from a SingleCellExperiment
object.
Value
An object of class matrix
Author(s)
Daniel C. Ellwanger
See Also
SingleCellExperiment reducedDim
Examples
1 2 3 4 5 | # Example data
data(exSCE)
# Get latent space
latentSpace(exSCE)[seq_len(5), ]
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.