plotStateExpression: Visualize feature expression distribution per state
In CellTrails: Reconstruction, visualization and analysis of branching trajectories
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Violin plots showing the expression distribution of a feature per state.
Usage
1
plotStateExpression(sce, feature_name)
Arguments
sce
A SingleCellExperiment object
feature_name
The name of the feature to be visualized
Details
Each data point displays the feature<e2><80><99>s expression value in a
single sample. A violine plot shows the density (mirrored on the y-axis) of
the expression distribution per sample.
Value
A ggplot object
Author(s)
Daniel C. Ellwanger
See Also
Examples
1
2
3
4
# Example data
data(exSCE)
plotStateExpression(exSCE, feature_name="feature_1")
CellTrails documentation built on Nov. 8, 2020, 5:53 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
Violin plots showing the expression distribution of a feature per state.
Usage
1 | plotStateExpression(sce, feature_name)
|
Arguments
sce |
A |
feature_name |
The name of the feature to be visualized |
Details
Each data point displays the feature<e2><80><99>s expression value in a single sample. A violine plot shows the density (mirrored on the y-axis) of the expression distribution per sample.
Value
A ggplot object
Author(s)
Daniel C. Ellwanger
See Also
Examples
1 2 3 4 | # Example data
data(exSCE)
plotStateExpression(exSCE, feature_name="feature_1")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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