plotTrajectoryFit: Visualize trajectory fit residuals
In CellTrails: Reconstruction, visualization and analysis of branching trajectories
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Method visualizes the fitting residuals along the
trajectory backbone.
Usage
1
plotTrajectoryFit(sce)
Arguments
sce
A SingleCellExperiment object
Details
Shows the trajectory backbone (longest shortest path
between two samples) and the fitting deviations of each sample
indicated by the perpendicular jitter. Data points are colorized
by state.
Value
A ggplot object
Author(s)
Daniel C. Ellwanger
See Also
Examples
1
2
3
4
# Example data
data(exSCE)
plotTrajectoryFit(exSCE)
CellTrails documentation built on Nov. 8, 2020, 5:53 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
Method visualizes the fitting residuals along the trajectory backbone.
Usage
1 | plotTrajectoryFit(sce)
|
Arguments
sce |
A |
Details
Shows the trajectory backbone (longest shortest path between two samples) and the fitting deviations of each sample indicated by the perpendicular jitter. Data points are colorized by state.
Value
A ggplot object
Author(s)
Daniel C. Ellwanger
See Also
Examples
1 2 3 4 | # Example data
data(exSCE)
plotTrajectoryFit(exSCE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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