accessors: Access slots of S4 classes

In ChIPseqR: Identifying Protein Binding Sites in High-Throughput Sequencing Data

Description

Accessor functions for S4 classes in package "ChIPseqR".

Usage

	## S4 method for signature 'ANY'
binding(x, ...)
	## S4 method for signature 'ANY'
cutoff(x, ...)
	## S4 replacement method for signature 'ANY'
cutoff(x, ...) <- value
	## S4 method for signature 'ANY'
nullDist(x, ...)
	## S4 replacement method for signature 'ANY'
nullDist(x, ...) <- value
	## S4 method for signature 'ANY'
peaks(x, ...)
	## S4 method for signature 'ANY'
pvalue(x, ...)
	## S4 method for signature 'ANY'
support(x, ...)

Arguments

x	An S4 object.
...	Further arguments, ignored by default method.
value	New value for slot.

Details

These methods allow safe read (and in some cases write) access to slots of S4 classes and should be used for this purpose rather than modifying slots manually.

Value

The current value of the interrogated slot.

Methods

x = "ANY"

Default method for accessor function.

Note

This page documents the generics and their default behaviour. See the help page of each class for class specific implementations.

Author(s)

Peter Humburg

See Also

ReadCounts, BindScore

ChIPseqR documentation built on Nov. 8, 2020, 6:49 p.m.