as.DESeqDataSet: Convert to DESeqDataSet

Description Usage Arguments Value Methods (by class) Author(s) See Also Examples

Description

Coerces an object to DESeqDataSet.

Usage

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as.DESeqDataSet(x, ...)

## S3 method for class 'DGEList'
as.DESeqDataSet(x, ...)

Arguments

x

an R object

...

additional arguments to be passed to methods

Value

A DESeqDataSet object

Methods (by class)

Author(s)

Andrzej Ole<c5><9b> <andrzej.oles@embl.de>, 2016-2017

See Also

as.DGEList

Examples

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require("edgeR")

counts = simulateRnaSeqData()
group = rep(c("case", "control"), each = 3)

dge = DGEList(counts = counts, group = group)
dge

as.DESeqDataSet(dge)

DEFormats documentation built on Nov. 8, 2020, 5:31 p.m.