Man pages for DEGraph
Two-sample tests on a graph
| annLoi2008 | Annotation data used in the DEGraph package vignette |
| AN.test | Performs the Adaptive Neyman test of Fan and Lin (1998) |
| BS.test | Performs the test of Bai and Saranadasa (1996) |
| classLoi2008 | Tamoxifen treatment resistance status data used in the... |
| exprLoi2008 | Gene expression data used in the DEGraph package vignette |
| getConnectedComponentList | Given a graph, returns a list of its connected components... |
| getKEGGPathways | Builds a graph for each of the KEGG pathways |
| getSignedGraph | Given a graph, builds a signed version of the adjacency... |
| graph.T2.test | Performs the Hotelling T2 test in Fourier space |
| grListKEGG | KEGG networks used in the DEGraph package vignette |
| hyper.test | Performs an hypergeometric test of enrichment of a set of... |
| laplacianFromA | Calculates the Laplacian associated to an adjacency matrix |
| plotValuedGraph | Plots a graph with nodes colored according to a quantitative... |
| randomWAMGraph | Generates a random graph |
| testOneConnectedComponent | Applies a series of two-sample tests to a connected graph... |
| testOneGraph | Applies a serie of two-sample tests to each connected... |
| twoSampleFromGraph | Given a basis (typically the eigenvectors of a graph... |
| writeAdjacencyMatrix2KGML | Writes an adjacency matrix into an XML file |
