Two-sample tests on a graph

annLoi2008 | Annotation data used in the DEGraph package vignette |

AN.test | Performs the Adaptive Neyman test of Fan and Lin (1998) |

BS.test | Performs the test of Bai and Saranadasa (1996) |

classLoi2008 | Tamoxifen treatment resistance status data used in the... |

exprLoi2008 | Gene expression data used in the DEGraph package vignette |

getConnectedComponentList | Given a graph, returns a list of its connected components... |

getKEGGPathways | Builds a graph for each of the KEGG pathways |

getSignedGraph | Given a graph, builds a signed version of the adjacency... |

graph.T2.test | Performs the Hotelling T2 test in Fourier space |

grListKEGG | KEGG networks used in the DEGraph package vignette |

hyper.test | Performs an hypergeometric test of enrichment of a set of... |

laplacianFromA | Calculates the Laplacian associated to an adjacency matrix |

plotValuedGraph | Plots a graph with nodes colored according to a quantitative... |

randomWAMGraph | Generates a random graph |

testOneConnectedComponent | Applies a series of two-sample tests to a connected graph... |

testOneGraph | Applies a serie of two-sample tests to each connected... |

twoSampleFromGraph | Given a basis (typically the eigenvectors of a graph... |

writeAdjacencyMatrix2KGML | Writes an adjacency matrix into an XML file |

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