API for DEP
Differential Enrichment analysis of Proteomics data

Global functions
.onLoad Source code
DEP Man page
DEP-package Man page
DiUbi Man page
DiUbi_ExpDesign Man page
LFQ Man page Source code
TMT Man page Source code
UbiLength Man page
UbiLength_ExpDesign Man page
add_rejections Man page
analyze_dep Man page Source code
delete_prefix Source code
delete_suffix Source code
filter_missval Man page Source code
filter_proteins Man page Source code
get_annotation Source code
get_df_long Man page
get_df_wide Man page
get_prefix Man page Source code
get_results Man page
get_suffix Man page Source code
import_IsobarQuant Man page Source code
import_MaxQuant Man page Source code
impute Man page Source code
make_se Man page Source code
make_se_parse Man page Source code
make_unique Man page Source code
manual_impute Man page Source code
meanSdPlot Man page Source code
normalize_vsn Man page Source code
plot_all Man page Source code
plot_cond Man page Source code
plot_cond_freq Man page Source code
plot_cond_overlap Man page Source code
plot_cor Man page Source code
plot_coverage Man page Source code
plot_detect Man page Source code
plot_dist Man page Source code
plot_frequency Man page Source code
plot_gsea Man page Source code
plot_heatmap Man page Source code
plot_imputation Man page Source code
plot_missval Man page Source code
plot_normalization Man page Source code
plot_numbers Man page Source code
plot_p_hist Man page
plot_pca Man page Source code
plot_single Man page Source code
plot_volcano Man page
process Man page Source code
report Man page Source code
run_app Man page Source code
se2msn Man page Source code
test_diff Man page Source code
test_gsea Man page Source code
theme_DEP1 Man page Source code
theme_DEP2 Man page Source code
DEP documentation built on Aug. 10, 2019, 2 a.m.